Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies

Advanced microbiome analysis relies on sequencing of short DNA fragments from microorganisms like bacteria, fungi, and viruses. More recently, long fragment DNA sequencing of 3rd generation sequencing has gained increasing importance and can be rapidly conducted within a few hours due to its potent...

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Autores principales:	Christoph Ammer-Herrmenau, Nina Pfisterer, Tim van den Berg, Ivana Gavrilova, Ahmad Amanzada, Shiv K. Singh, Alaa Khalil, Rohia Alili, Eugeni Belda, Karine Clement, Ahmed Abd El Wahed, ElSagad Eltayeb Gady, Martin Haubrock, Tim Beißbarth, Volker Ellenrieder, Albrecht Neesse
Formato:	article
Lenguaje:	EN
Publicado:	American Society for Microbiology 2021
Materias:	Microbiology QR1-502
Acceso en línea:	https://doaj.org/article/9368c7ba407642fabca0ad62801aa4de
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spelling	oai:doaj.org-article:9368c7ba407642fabca0ad62801aa4de2021-12-02T17:49:14ZComprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies2379-507710.1128/mSystems.00750-21https://doaj.org/article/9368c7ba407642fabca0ad62801aa4de2021-08-01T00:00:00Zhttps://journals.asm.org/doi/10.1128/mSystems.00750-21https://doaj.org/toc/2379-5077 Advanced microbiome analysis relies on sequencing of short DNA fragments from microorganisms like bacteria, fungi, and viruses. More recently, long fragment DNA sequencing of 3rd generation sequencing has gained increasing importance and can be rapidly conducted within a few hours due to its potential real-time sequencing.Christoph Ammer-HerrmenauNina PfistererTim van den BergIvana GavrilovaAhmad AmanzadaShiv K. SinghAlaa KhalilRohia AliliEugeni BeldaKarine ClementAhmed Abd El WahedElSagad Eltayeb GadyMartin HaubrockTim BeißbarthVolker EllenriederAlbrecht NeesseAmerican Society for MicrobiologyarticleMicrobiologyQR1-502ENmSystems, Vol 6, Iss 4 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Microbiology QR1-502
spellingShingle	Microbiology QR1-502 Christoph Ammer-Herrmenau Nina Pfisterer Tim van den Berg Ivana Gavrilova Ahmad Amanzada Shiv K. Singh Alaa Khalil Rohia Alili Eugeni Belda Karine Clement Ahmed Abd El Wahed ElSagad Eltayeb Gady Martin Haubrock Tim Beißbarth Volker Ellenrieder Albrecht Neesse Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
description	Advanced microbiome analysis relies on sequencing of short DNA fragments from microorganisms like bacteria, fungi, and viruses. More recently, long fragment DNA sequencing of 3rd generation sequencing has gained increasing importance and can be rapidly conducted within a few hours due to its potential real-time sequencing.
format	article
author	Christoph Ammer-Herrmenau Nina Pfisterer Tim van den Berg Ivana Gavrilova Ahmad Amanzada Shiv K. Singh Alaa Khalil Rohia Alili Eugeni Belda Karine Clement Ahmed Abd El Wahed ElSagad Eltayeb Gady Martin Haubrock Tim Beißbarth Volker Ellenrieder Albrecht Neesse
author_facet	Christoph Ammer-Herrmenau Nina Pfisterer Tim van den Berg Ivana Gavrilova Ahmad Amanzada Shiv K. Singh Alaa Khalil Rohia Alili Eugeni Belda Karine Clement Ahmed Abd El Wahed ElSagad Eltayeb Gady Martin Haubrock Tim Beißbarth Volker Ellenrieder Albrecht Neesse
author_sort	Christoph Ammer-Herrmenau
title	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
title_short	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
title_full	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
title_fullStr	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
title_full_unstemmed	Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies
title_sort	comprehensive wet-bench and bioinformatics workflow for complex microbiota using oxford nanopore technologies
publisher	American Society for Microbiology
publishDate	2021
url	https://doaj.org/article/9368c7ba407642fabca0ad62801aa4de
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Comprehensive Wet-Bench and Bioinformatics Workflow for Complex Microbiota Using Oxford Nanopore Technologies

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