Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples

Abstract Soda lakes are saline and alkaline ecosystems that are considered to have existed since the first geological records of the world. These lakes support the growth of ecologically and economically important microorganisms due to their unique geochemistry. Microbiota members of lakes are valua...

Descripción completa

Guardado en:

Detalles Bibliográficos
Autores principales:	Esra Ersoy Omeroglu, Mert Sudagidan, Mediha Nur Zafer Yurt, Behiye Busra Tasbasi, Elif Esma Acar, Veli Cengiz Ozalp
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2021
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/950c8ff0ca5f4c0e98854cbf1de8fef6
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

id	oai:doaj.org-article:950c8ff0ca5f4c0e98854cbf1de8fef6
record_format	dspace
spelling	oai:doaj.org-article:950c8ff0ca5f4c0e98854cbf1de8fef62021-12-02T17:24:02ZMicrobial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples10.1038/s41598-021-97980-32045-2322https://doaj.org/article/950c8ff0ca5f4c0e98854cbf1de8fef62021-09-01T00:00:00Zhttps://doi.org/10.1038/s41598-021-97980-3https://doaj.org/toc/2045-2322Abstract Soda lakes are saline and alkaline ecosystems that are considered to have existed since the first geological records of the world. These lakes support the growth of ecologically and economically important microorganisms due to their unique geochemistry. Microbiota members of lakes are valuable models to study the link between community structure and abiotic parameters such as pH and salinity. Lake Van is the largest endroheic lake and in this study, bacterial diversity of lake water, sediment, and pearl mullet (inci kefali; Alburnus tarichi), an endemic species of fish which are collected from different points of the lake, are studied directly and investigated meticulously using a metabarcoding approach after pre-enrichment. Bacterial community structures were identified using Next Generation Sequencing of the 16S rRNA gene. The analysis revealed that the samples of Lake Van contain high level of bacterial diversity. Direct water samples were dominated by Proteobacteria, Cyanobacteria, and Bacteroidota, on the other hand, pre-enriched water samples were dominated by Proteobacteria and Firmicutes at phylum-level. In direct sediment samples Proteobacteria, whereas in pre-enriched sediment samples Firmicutes and Proteobacteria were determined at highest level. Pre-enriched fish samples were dominated by Proteobacteria and Firmicutes at phylum-level. In this study, microbiota members of Lake Van were identified by taxonomic analysis.Esra Ersoy OmerogluMert SudagidanMediha Nur Zafer YurtBehiye Busra TasbasiElif Esma AcarVeli Cengiz OzalpNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 11, Iss 1, Pp 1-13 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Esra Ersoy Omeroglu Mert Sudagidan Mediha Nur Zafer Yurt Behiye Busra Tasbasi Elif Esma Acar Veli Cengiz Ozalp Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
description	Abstract Soda lakes are saline and alkaline ecosystems that are considered to have existed since the first geological records of the world. These lakes support the growth of ecologically and economically important microorganisms due to their unique geochemistry. Microbiota members of lakes are valuable models to study the link between community structure and abiotic parameters such as pH and salinity. Lake Van is the largest endroheic lake and in this study, bacterial diversity of lake water, sediment, and pearl mullet (inci kefali; Alburnus tarichi), an endemic species of fish which are collected from different points of the lake, are studied directly and investigated meticulously using a metabarcoding approach after pre-enrichment. Bacterial community structures were identified using Next Generation Sequencing of the 16S rRNA gene. The analysis revealed that the samples of Lake Van contain high level of bacterial diversity. Direct water samples were dominated by Proteobacteria, Cyanobacteria, and Bacteroidota, on the other hand, pre-enriched water samples were dominated by Proteobacteria and Firmicutes at phylum-level. In direct sediment samples Proteobacteria, whereas in pre-enriched sediment samples Firmicutes and Proteobacteria were determined at highest level. Pre-enriched fish samples were dominated by Proteobacteria and Firmicutes at phylum-level. In this study, microbiota members of Lake Van were identified by taxonomic analysis.
format	article
author	Esra Ersoy Omeroglu Mert Sudagidan Mediha Nur Zafer Yurt Behiye Busra Tasbasi Elif Esma Acar Veli Cengiz Ozalp
author_facet	Esra Ersoy Omeroglu Mert Sudagidan Mediha Nur Zafer Yurt Behiye Busra Tasbasi Elif Esma Acar Veli Cengiz Ozalp
author_sort	Esra Ersoy Omeroglu
title	Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
title_short	Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
title_full	Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
title_fullStr	Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
title_full_unstemmed	Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples
title_sort	microbial community of soda lake van as obtained from direct and enriched water, sediment and fish samples
publisher	Nature Portfolio
publishDate	2021
url	https://doaj.org/article/950c8ff0ca5f4c0e98854cbf1de8fef6
work_keys_str_mv	AT esraersoyomeroglu microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples AT mertsudagidan microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples AT medihanurzaferyurt microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples AT behiyebusratasbasi microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples AT elifesmaacar microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples AT velicengizozalp microbialcommunityofsodalakevanasobtainedfromdirectandenrichedwatersedimentandfishsamples
_version_	1718380924138160128

Microbial community of soda Lake Van as obtained from direct and enriched water, sediment and fish samples

Ejemplares similares