A reference haplotype panel for genome-wide imputation of short tandem repeats
Short-tandem repeats (STR), similar to single nucleotide polymorphisms (SNP), contribute to complex traits, but their ascertainment by next-generation sequencing is costly. Here, Saini et al. provide a SNP+STR haplotype reference panel that allows imputation of STRs from SNP array data.
Saved in:
Main Authors: | Shubham Saini, Ileena Mitra, Nima Mousavi, Stephanie Feupe Fotsing, Melissa Gymrek |
---|---|
Format: | article |
Language: | EN |
Published: |
Nature Portfolio
2018
|
Subjects: | |
Online Access: | https://doaj.org/article/9f8d4564b6244aad87e5c7da7129b2db |
Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
Similar Items
-
A population-specific reference panel for improved genotype imputation in African Americans
by: Jared O’Connell, et al.
Published: (2021) -
Variable number tandem repeats mediate the expression of proximal genes
by: Mehrdad Bakhtiari, et al.
Published: (2021) -
Inclusion of Population-specific Reference Panel from India to the 1000 Genomes Phase 3 Panel Improves Imputation Accuracy
by: Meraj Ahmad, et al.
Published: (2017) -
Properties of structural variants and short tandem repeats associated with gene expression and complex traits
by: David Jakubosky, et al.
Published: (2020) -
Discovery and quality analysis of a comprehensive set of structural variants and short tandem repeats
by: David Jakubosky, et al.
Published: (2020)