FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science

To be able to use infectious disease next generation sequencing as a diagnostic tool, appropriate reference datasets are required. Here, Sichtig et al. describe FDA-ARGOS, a reference database for high-quality microbial reference genomes, and demonstrate its utility on the example of two use cases.

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Autores principales: Heike Sichtig, Timothy Minogue, Yi Yan, Christopher Stefan, Adrienne Hall, Luke Tallon, Lisa Sadzewicz, Suvarna Nadendla, William Klimke, Eneida Hatcher, Martin Shumway, Dayanara Lebron Aldea, Jonathan Allen, Jeffrey Koehler, Tom Slezak, Stephen Lovell, Randal Schoepp, Uwe Scherf
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2019
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Acceso en línea:https://doaj.org/article/a0233f5c8af641e8ad4b88571f30d00f
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spelling oai:doaj.org-article:a0233f5c8af641e8ad4b88571f30d00f2021-12-02T14:40:01ZFDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science10.1038/s41467-019-11306-62041-1723https://doaj.org/article/a0233f5c8af641e8ad4b88571f30d00f2019-07-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-11306-6https://doaj.org/toc/2041-1723To be able to use infectious disease next generation sequencing as a diagnostic tool, appropriate reference datasets are required. Here, Sichtig et al. describe FDA-ARGOS, a reference database for high-quality microbial reference genomes, and demonstrate its utility on the example of two use cases.Heike SichtigTimothy MinogueYi YanChristopher StefanAdrienne HallLuke TallonLisa SadzewiczSuvarna NadendlaWilliam KlimkeEneida HatcherMartin ShumwayDayanara Lebron AldeaJonathan AllenJeffrey KoehlerTom SlezakStephen LovellRandal SchoeppUwe ScherfNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Heike Sichtig
Timothy Minogue
Yi Yan
Christopher Stefan
Adrienne Hall
Luke Tallon
Lisa Sadzewicz
Suvarna Nadendla
William Klimke
Eneida Hatcher
Martin Shumway
Dayanara Lebron Aldea
Jonathan Allen
Jeffrey Koehler
Tom Slezak
Stephen Lovell
Randal Schoepp
Uwe Scherf
FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
description To be able to use infectious disease next generation sequencing as a diagnostic tool, appropriate reference datasets are required. Here, Sichtig et al. describe FDA-ARGOS, a reference database for high-quality microbial reference genomes, and demonstrate its utility on the example of two use cases.
format article
author Heike Sichtig
Timothy Minogue
Yi Yan
Christopher Stefan
Adrienne Hall
Luke Tallon
Lisa Sadzewicz
Suvarna Nadendla
William Klimke
Eneida Hatcher
Martin Shumway
Dayanara Lebron Aldea
Jonathan Allen
Jeffrey Koehler
Tom Slezak
Stephen Lovell
Randal Schoepp
Uwe Scherf
author_facet Heike Sichtig
Timothy Minogue
Yi Yan
Christopher Stefan
Adrienne Hall
Luke Tallon
Lisa Sadzewicz
Suvarna Nadendla
William Klimke
Eneida Hatcher
Martin Shumway
Dayanara Lebron Aldea
Jonathan Allen
Jeffrey Koehler
Tom Slezak
Stephen Lovell
Randal Schoepp
Uwe Scherf
author_sort Heike Sichtig
title FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
title_short FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
title_full FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
title_fullStr FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
title_full_unstemmed FDA-ARGOS is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
title_sort fda-argos is a database with public quality-controlled reference genomes for diagnostic use and regulatory science
publisher Nature Portfolio
publishDate 2019
url https://doaj.org/article/a0233f5c8af641e8ad4b88571f30d00f
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