A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions
Protein-protein interactions (PPIs) play a major role in defining biological functions. Here, the authors present PPiSeq, a method to quantitatively score dynamic PPIs in yeast combining fragment complementation assays, genomic double-barcoding, and an analytical framework to precisely call fitness...
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Nature Portfolio
2017
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oai:doaj.org-article:a2d1f7e3c1634cb29a0d1f9355ce7b112021-12-02T14:42:39ZA scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions10.1038/ncomms155862041-1723https://doaj.org/article/a2d1f7e3c1634cb29a0d1f9355ce7b112017-05-01T00:00:00Zhttps://doi.org/10.1038/ncomms15586https://doaj.org/toc/2041-1723Protein-protein interactions (PPIs) play a major role in defining biological functions. Here, the authors present PPiSeq, a method to quantitatively score dynamic PPIs in yeast combining fragment complementation assays, genomic double-barcoding, and an analytical framework to precisely call fitness from barcode lineage trajectories.Ulrich SchlechtZhimin LiuJamie R. BlundellRobert P. St.OngeSasha F. LevyNature PortfolioarticleScienceQENNature Communications, Vol 8, Iss 1, Pp 1-9 (2017) |
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Science Q Ulrich Schlecht Zhimin Liu Jamie R. Blundell Robert P. St.Onge Sasha F. Levy A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
description |
Protein-protein interactions (PPIs) play a major role in defining biological functions. Here, the authors present PPiSeq, a method to quantitatively score dynamic PPIs in yeast combining fragment complementation assays, genomic double-barcoding, and an analytical framework to precisely call fitness from barcode lineage trajectories. |
format |
article |
author |
Ulrich Schlecht Zhimin Liu Jamie R. Blundell Robert P. St.Onge Sasha F. Levy |
author_facet |
Ulrich Schlecht Zhimin Liu Jamie R. Blundell Robert P. St.Onge Sasha F. Levy |
author_sort |
Ulrich Schlecht |
title |
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
title_short |
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
title_full |
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
title_fullStr |
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
title_full_unstemmed |
A scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
title_sort |
scalable double-barcode sequencing platform for characterization of dynamic protein-protein interactions |
publisher |
Nature Portfolio |
publishDate |
2017 |
url |
https://doaj.org/article/a2d1f7e3c1634cb29a0d1f9355ce7b11 |
work_keys_str_mv |
AT ulrichschlecht ascalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT zhiminliu ascalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT jamierblundell ascalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT robertpstonge ascalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT sashaflevy ascalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT ulrichschlecht scalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT zhiminliu scalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT jamierblundell scalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT robertpstonge scalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions AT sashaflevy scalabledoublebarcodesequencingplatformforcharacterizationofdynamicproteinproteininteractions |
_version_ |
1718389649398824960 |