Synthetic spike-in standards improve run-specific systematic error analysis for DNA and RNA sequencing.

While the importance of random sequencing errors decreases at higher DNA or RNA sequencing depths, systematic sequencing errors (SSEs) dominate at high sequencing depths and can be difficult to distinguish from biological variants. These SSEs can cause base quality scores to underestimate the probab...

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Bibliographic Details
Main Authors: Justin M Zook, Daniel Samarov, Jennifer McDaniel, Shurjo K Sen, Marc Salit
Format: article
Language:EN
Published: Public Library of Science (PLoS) 2012
Subjects:
R
Q
Online Access:https://doaj.org/article/a35ecb62c8ca4ec2a8ace6b4145a01de
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