Systematic benchmarking of omics computational tools

Benchmarking studies are important for comprehensively understanding and evaluating different computational omics methods. Here, the authors review practices from 25 recent studies and propose principles to improve the quality of benchmarking studies.

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Autores principales: Serghei Mangul, Lana S. Martin, Brian L. Hill, Angela Ka-Mei Lam, Margaret G. Distler, Alex Zelikovsky, Eleazar Eskin, Jonathan Flint
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2019
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Acceso en línea:https://doaj.org/article/a3c0bd0bb13543f8b62f96c08042e5be
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spelling oai:doaj.org-article:a3c0bd0bb13543f8b62f96c08042e5be2021-12-02T15:36:02ZSystematic benchmarking of omics computational tools10.1038/s41467-019-09406-42041-1723https://doaj.org/article/a3c0bd0bb13543f8b62f96c08042e5be2019-03-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-09406-4https://doaj.org/toc/2041-1723Benchmarking studies are important for comprehensively understanding and evaluating different computational omics methods. Here, the authors review practices from 25 recent studies and propose principles to improve the quality of benchmarking studies.Serghei MangulLana S. MartinBrian L. HillAngela Ka-Mei LamMargaret G. DistlerAlex ZelikovskyEleazar EskinJonathan FlintNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-11 (2019)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Serghei Mangul
Lana S. Martin
Brian L. Hill
Angela Ka-Mei Lam
Margaret G. Distler
Alex Zelikovsky
Eleazar Eskin
Jonathan Flint
Systematic benchmarking of omics computational tools
description Benchmarking studies are important for comprehensively understanding and evaluating different computational omics methods. Here, the authors review practices from 25 recent studies and propose principles to improve the quality of benchmarking studies.
format article
author Serghei Mangul
Lana S. Martin
Brian L. Hill
Angela Ka-Mei Lam
Margaret G. Distler
Alex Zelikovsky
Eleazar Eskin
Jonathan Flint
author_facet Serghei Mangul
Lana S. Martin
Brian L. Hill
Angela Ka-Mei Lam
Margaret G. Distler
Alex Zelikovsky
Eleazar Eskin
Jonathan Flint
author_sort Serghei Mangul
title Systematic benchmarking of omics computational tools
title_short Systematic benchmarking of omics computational tools
title_full Systematic benchmarking of omics computational tools
title_fullStr Systematic benchmarking of omics computational tools
title_full_unstemmed Systematic benchmarking of omics computational tools
title_sort systematic benchmarking of omics computational tools
publisher Nature Portfolio
publishDate 2019
url https://doaj.org/article/a3c0bd0bb13543f8b62f96c08042e5be
work_keys_str_mv AT sergheimangul systematicbenchmarkingofomicscomputationaltools
AT lanasmartin systematicbenchmarkingofomicscomputationaltools
AT brianlhill systematicbenchmarkingofomicscomputationaltools
AT angelakameilam systematicbenchmarkingofomicscomputationaltools
AT margaretgdistler systematicbenchmarkingofomicscomputationaltools
AT alexzelikovsky systematicbenchmarkingofomicscomputationaltools
AT eleazareskin systematicbenchmarkingofomicscomputationaltools
AT jonathanflint systematicbenchmarkingofomicscomputationaltools
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