A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome

A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome

To date, little is known about the regulatory landscape of the pig genome. Here, the authors characterize cis-regulatory elements in the pig genome using RNA-seq, ChIP-Seq and ATAC-seq, finding a higher degree of usage conservation between pig and human than mouse and human.

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Autores principales: Yunxia Zhao, Ye Hou, Yueyuan Xu, Yu Luan, Huanhuan Zhou, Xiaolong Qi, Mingyang Hu, Daoyuan Wang, Zhangxu Wang, Yuhua Fu, Jingjin Li, Saixian Zhang, Jianhai Chen, Jianlin Han, Xinyun Li, Shuhong Zhao
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2021
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Acceso en línea:https://doaj.org/article/a5d70266915c440386d5e1371943797e
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spelling oai:doaj.org-article:a5d70266915c440386d5e1371943797e2021-12-02T14:25:16ZA compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome10.1038/s41467-021-22448-x2041-1723https://doaj.org/article/a5d70266915c440386d5e1371943797e2021-04-01T00:00:00Zhttps://doi.org/10.1038/s41467-021-22448-xhttps://doaj.org/toc/2041-1723To date, little is known about the regulatory landscape of the pig genome. Here, the authors characterize cis-regulatory elements in the pig genome using RNA-seq, ChIP-Seq and ATAC-seq, finding a higher degree of usage conservation between pig and human than mouse and human.Yunxia ZhaoYe HouYueyuan XuYu LuanHuanhuan ZhouXiaolong QiMingyang HuDaoyuan WangZhangxu WangYuhua FuJingjin LiSaixian ZhangJianhai ChenJianlin HanXinyun LiShuhong ZhaoNature PortfolioarticleScienceQENNature Communications, Vol 12, Iss 1, Pp 1-17 (2021)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Yunxia Zhao
Ye Hou
Yueyuan Xu
Yu Luan
Huanhuan Zhou
Xiaolong Qi
Mingyang Hu
Daoyuan Wang
Zhangxu Wang
Yuhua Fu
Jingjin Li
Saixian Zhang
Jianhai Chen
Jianlin Han
Xinyun Li
Shuhong Zhao
A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
description To date, little is known about the regulatory landscape of the pig genome. Here, the authors characterize cis-regulatory elements in the pig genome using RNA-seq, ChIP-Seq and ATAC-seq, finding a higher degree of usage conservation between pig and human than mouse and human.
format article
author Yunxia Zhao
Ye Hou
Yueyuan Xu
Yu Luan
Huanhuan Zhou
Xiaolong Qi
Mingyang Hu
Daoyuan Wang
Zhangxu Wang
Yuhua Fu
Jingjin Li
Saixian Zhang
Jianhai Chen
Jianlin Han
Xinyun Li
Shuhong Zhao
author_facet Yunxia Zhao
Ye Hou
Yueyuan Xu
Yu Luan
Huanhuan Zhou
Xiaolong Qi
Mingyang Hu
Daoyuan Wang
Zhangxu Wang
Yuhua Fu
Jingjin Li
Saixian Zhang
Jianhai Chen
Jianlin Han
Xinyun Li
Shuhong Zhao
author_sort Yunxia Zhao
title A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
title_short A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
title_full A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
title_fullStr A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
title_full_unstemmed A compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
title_sort compendium and comparative epigenomics analysis of cis-regulatory elements in the pig genome
publisher Nature Portfolio
publishDate 2021
url https://doaj.org/article/a5d70266915c440386d5e1371943797e
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