Profiling variable-number tandem repeat variation across populations using repeat-pangenome graphs
Variable number tandem repeats (VNTRs) are difficult to analyze by short-read sequencing in disease studies. Here, the authors describe a VNTR mapping strategy for short-read analyses using a repeat pangenome graph. This method will help elucidate the contribution of VNTRs to diversity and disease.
Guardado en:
Autores principales: | Tsung-Yu Lu, The Human Genome Structural Variation Consortium, Mark J. P. Chaisson |
---|---|
Formato: | article |
Lenguaje: | EN |
Publicado: |
Nature Portfolio
2021
|
Materias: | |
Acceso en línea: | https://doaj.org/article/a62e10329da24fef97c378d11249445d |
Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
-
Variable number tandem repeats mediate the expression of proximal genes
por: Mehrdad Bakhtiari, et al.
Publicado: (2021) -
Association of Two Variable Number of Tandem Repeats in the Monoamine Oxidase A Gene Promoter with Schizophrenia
por: Tanifuji T, et al.
Publicado: (2021) -
Development of a hierarchical variable-number tandem repeat typing scheme for Mycobacterium tuberculosis in China.
por: Tao Luo, et al.
Publicado: (2014) -
Genetic Characterization of Brucella spp.: Whole Genome Sequencing-Based Approach for the Determination of Multiple Locus Variable Number Tandem Repeat Profiles
por: Ana Pelerito, et al.
Publicado: (2021) -
Diversity of Acinetobacter baumannii in four French military hospitals, as assessed by multiple locus variable number of tandem repeats analysis.
por: Yolande Hauck, et al.
Publicado: (2012)