Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation

Three-dimensional genome organization and its effect on transcription remain elusive in rice. Here, the authors map promoter–promoter interactions and heterochromatin interactions using ChIA-PET and reveal spatial correlation between the genetic regulation of eQTLs and e-traits.

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Autores principales:	Lun Zhao, Shuangqi Wang, Zhilin Cao, Weizhi Ouyang, Qing Zhang, Liang Xie, Ruiqin Zheng, Minrong Guo, Meng Ma, Zhe Hu, Wing-Kin Sung, Qifa Zhang, Guoliang Li, Xingwang Li
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2019
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/a67460ba57eb4068b142e258042f90e3
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spelling	oai:doaj.org-article:a67460ba57eb4068b142e258042f90e32021-12-02T17:01:27ZChromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation10.1038/s41467-019-11535-92041-1723https://doaj.org/article/a67460ba57eb4068b142e258042f90e32019-08-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-11535-9https://doaj.org/toc/2041-1723Three-dimensional genome organization and its effect on transcription remain elusive in rice. Here, the authors map promoter–promoter interactions and heterochromatin interactions using ChIA-PET and reveal spatial correlation between the genetic regulation of eQTLs and e-traits.Lun ZhaoShuangqi WangZhilin CaoWeizhi OuyangQing ZhangLiang XieRuiqin ZhengMinrong GuoMeng MaZhe HuWing-Kin SungQifa ZhangGuoliang LiXingwang LiNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-13 (2019)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Lun Zhao Shuangqi Wang Zhilin Cao Weizhi Ouyang Qing Zhang Liang Xie Ruiqin Zheng Minrong Guo Meng Ma Zhe Hu Wing-Kin Sung Qifa Zhang Guoliang Li Xingwang Li Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
description	Three-dimensional genome organization and its effect on transcription remain elusive in rice. Here, the authors map promoter–promoter interactions and heterochromatin interactions using ChIA-PET and reveal spatial correlation between the genetic regulation of eQTLs and e-traits.
format	article
author	Lun Zhao Shuangqi Wang Zhilin Cao Weizhi Ouyang Qing Zhang Liang Xie Ruiqin Zheng Minrong Guo Meng Ma Zhe Hu Wing-Kin Sung Qifa Zhang Guoliang Li Xingwang Li
author_facet	Lun Zhao Shuangqi Wang Zhilin Cao Weizhi Ouyang Qing Zhang Liang Xie Ruiqin Zheng Minrong Guo Meng Ma Zhe Hu Wing-Kin Sung Qifa Zhang Guoliang Li Xingwang Li
author_sort	Lun Zhao
title	Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
title_short	Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
title_full	Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
title_fullStr	Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
title_full_unstemmed	Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
title_sort	chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation
publisher	Nature Portfolio
publishDate	2019
url	https://doaj.org/article/a67460ba57eb4068b142e258042f90e3
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_version_	1718382165579792384

Chromatin loops associated with active genes and heterochromatin shape rice genome architecture for transcriptional regulation

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