Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane

Ratoon stunt caused by Leifsonia xyli subsp. xyli (Lxx) is widely spread across sugarcane planting regions. Here, transcriptomics and cytology were conducted to analyze the changes in gene expression levels and chloroplast ultrastructures after Lxx inoculation. A total of 90.26 Gb clean bases, 156,7...

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Autores principales:	Xiaoqiu Zhang, Yongjian Liang, Xiupeng Song, Zeping Wang, Baoqing Zhang, Jingchao Lei, Yangrui Li, Meixin Yan
Formato:	article
Lenguaje:	EN
Publicado:	Taylor & Francis Group 2021
Materias:	sugarcane ratoon stunt transcriptomics gene expression ultrastructure Plant culture SB1-1110 Plant ecology QK900-989
Acceso en línea:	https://doaj.org/article/a8bb2cf10c014caca8d8e888586d2318
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spelling	oai:doaj.org-article:a8bb2cf10c014caca8d8e888586d23182021-11-26T11:19:47ZChanges in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane1742-91451742-915310.1080/17429145.2021.2003881https://doaj.org/article/a8bb2cf10c014caca8d8e888586d23182021-01-01T00:00:00Zhttp://dx.doi.org/10.1080/17429145.2021.2003881https://doaj.org/toc/1742-9145https://doaj.org/toc/1742-9153Ratoon stunt caused by Leifsonia xyli subsp. xyli (Lxx) is widely spread across sugarcane planting regions. Here, transcriptomics and cytology were conducted to analyze the changes in gene expression levels and chloroplast ultrastructures after Lxx inoculation. A total of 90.26 Gb clean bases, 156,713 unigenes and 406 differentially expressed genes were obtained. The genes of HSP and ACS were continuously differentially expressed. The photosynthesis-related genes of PsbO, PsbQ, PsaD, PsaE, PsaG and PsaH were up-regulated. PIRH2, WRKY, NCED, AHP and GST were identified as the important specific genes that responded to Lxx inoculation. Lxx inoculation also altered the shape and damaged the membrane of chloroplasts in sugarcane leaves. Sugarcane responds to Lxx infection likely via changing the expression levels of some specific genes and interfered with photosynthesis. A possible molecular regulation network induced by Lxx was speculated. These findings broaden the understanding to the mechanisms of the interaction between sugarcane and Lxx.Xiaoqiu ZhangYongjian LiangXiupeng SongZeping WangBaoqing ZhangJingchao LeiYangrui LiMeixin YanTaylor & Francis Grouparticlesugarcaneratoon stunttranscriptomicsgene expressionultrastructurePlant cultureSB1-1110Plant ecologyQK900-989ENJournal of Plant Interactions, Vol 16, Iss 1, Pp 564-574 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	sugarcane ratoon stunt transcriptomics gene expression ultrastructure Plant culture SB1-1110 Plant ecology QK900-989
spellingShingle	sugarcane ratoon stunt transcriptomics gene expression ultrastructure Plant culture SB1-1110 Plant ecology QK900-989 Xiaoqiu Zhang Yongjian Liang Xiupeng Song Zeping Wang Baoqing Zhang Jingchao Lei Yangrui Li Meixin Yan Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
description	Ratoon stunt caused by Leifsonia xyli subsp. xyli (Lxx) is widely spread across sugarcane planting regions. Here, transcriptomics and cytology were conducted to analyze the changes in gene expression levels and chloroplast ultrastructures after Lxx inoculation. A total of 90.26 Gb clean bases, 156,713 unigenes and 406 differentially expressed genes were obtained. The genes of HSP and ACS were continuously differentially expressed. The photosynthesis-related genes of PsbO, PsbQ, PsaD, PsaE, PsaG and PsaH were up-regulated. PIRH2, WRKY, NCED, AHP and GST were identified as the important specific genes that responded to Lxx inoculation. Lxx inoculation also altered the shape and damaged the membrane of chloroplasts in sugarcane leaves. Sugarcane responds to Lxx infection likely via changing the expression levels of some specific genes and interfered with photosynthesis. A possible molecular regulation network induced by Lxx was speculated. These findings broaden the understanding to the mechanisms of the interaction between sugarcane and Lxx.
format	article
author	Xiaoqiu Zhang Yongjian Liang Xiupeng Song Zeping Wang Baoqing Zhang Jingchao Lei Yangrui Li Meixin Yan
author_facet	Xiaoqiu Zhang Yongjian Liang Xiupeng Song Zeping Wang Baoqing Zhang Jingchao Lei Yangrui Li Meixin Yan
author_sort	Xiaoqiu Zhang
title	Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
title_short	Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
title_full	Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
title_fullStr	Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
title_full_unstemmed	Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane
title_sort	changes in gene expression levels and chloroplast anatomy induced by leifsonia xyli subsp. xyli in sugarcane
publisher	Taylor & Francis Group
publishDate	2021
url	https://doaj.org/article/a8bb2cf10c014caca8d8e888586d2318
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_version_	1718409553869012992

Changes in gene expression levels and chloroplast anatomy induced by Leifsonia xyli subsp. xyli in sugarcane

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