Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd
A wealth of gene expression data is publicly available, yet is little use without additional human curation. Ma’ayan and colleagues report a crowdsourcing project involving over 70 participants to annotate and analyse thousands of human disease-related gene expression datasets.
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Nature Portfolio
2016
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oai:doaj.org-article:a8f2b28d890e4a0e99fc75b9634da8c02021-12-02T17:33:19ZExtraction and analysis of signatures from the Gene Expression Omnibus by the crowd10.1038/ncomms128462041-1723https://doaj.org/article/a8f2b28d890e4a0e99fc75b9634da8c02016-09-01T00:00:00Zhttps://doi.org/10.1038/ncomms12846https://doaj.org/toc/2041-1723A wealth of gene expression data is publicly available, yet is little use without additional human curation. Ma’ayan and colleagues report a crowdsourcing project involving over 70 participants to annotate and analyse thousands of human disease-related gene expression datasets.Zichen WangCaroline D. MonteiroKathleen M. JagodnikNicolas F. FernandezGregory W. GundersenAndrew D. RouillardSherry L. JenkinsAxel S. FeldmannKevin S. HuMichael G. McDermottQiaonan DuanNeil R. ClarkMatthew R. JonesYan KouTroy GoffHolly WoodlandFabio M R. AmaralGregory L. SzetoOliver FuchsSophia M. Schüssler-Fiorenza RoseShvetank SharmaUwe SchwartzXabier Bengoetxea BauselaMaciej SzymkiewiczVasileios MaroulisAnton SalykinCarolina M. BarraCandice D. KruthNicholas J. BongioVaibhav MathurRadmila D TodoricUdi E. RubinApostolos MalatrasCarl T. FulpJohn A. GalindoRuta MotiejunaiteChristoph JüschkePhilip C. DishuckKatharina LahlMohieddin JafariSara AibarApostolos ZaravinosLinda H. SteenhuizenLindsey R. AllisonPablo GamalloFernando de Andres SeguraTyler Dae DevlinVicente Pérez-GarcíaAvi Ma’ayanNature PortfolioarticleScienceQENNature Communications, Vol 7, Iss 1, Pp 1-11 (2016) |
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DOAJ |
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DOAJ |
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EN |
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Science Q |
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Science Q Zichen Wang Caroline D. Monteiro Kathleen M. Jagodnik Nicolas F. Fernandez Gregory W. Gundersen Andrew D. Rouillard Sherry L. Jenkins Axel S. Feldmann Kevin S. Hu Michael G. McDermott Qiaonan Duan Neil R. Clark Matthew R. Jones Yan Kou Troy Goff Holly Woodland Fabio M R. Amaral Gregory L. Szeto Oliver Fuchs Sophia M. Schüssler-Fiorenza Rose Shvetank Sharma Uwe Schwartz Xabier Bengoetxea Bausela Maciej Szymkiewicz Vasileios Maroulis Anton Salykin Carolina M. Barra Candice D. Kruth Nicholas J. Bongio Vaibhav Mathur Radmila D Todoric Udi E. Rubin Apostolos Malatras Carl T. Fulp John A. Galindo Ruta Motiejunaite Christoph Jüschke Philip C. Dishuck Katharina Lahl Mohieddin Jafari Sara Aibar Apostolos Zaravinos Linda H. Steenhuizen Lindsey R. Allison Pablo Gamallo Fernando de Andres Segura Tyler Dae Devlin Vicente Pérez-García Avi Ma’ayan Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| description |
A wealth of gene expression data is publicly available, yet is little use without additional human curation. Ma’ayan and colleagues report a crowdsourcing project involving over 70 participants to annotate and analyse thousands of human disease-related gene expression datasets. |
| format |
article |
| author |
Zichen Wang Caroline D. Monteiro Kathleen M. Jagodnik Nicolas F. Fernandez Gregory W. Gundersen Andrew D. Rouillard Sherry L. Jenkins Axel S. Feldmann Kevin S. Hu Michael G. McDermott Qiaonan Duan Neil R. Clark Matthew R. Jones Yan Kou Troy Goff Holly Woodland Fabio M R. Amaral Gregory L. Szeto Oliver Fuchs Sophia M. Schüssler-Fiorenza Rose Shvetank Sharma Uwe Schwartz Xabier Bengoetxea Bausela Maciej Szymkiewicz Vasileios Maroulis Anton Salykin Carolina M. Barra Candice D. Kruth Nicholas J. Bongio Vaibhav Mathur Radmila D Todoric Udi E. Rubin Apostolos Malatras Carl T. Fulp John A. Galindo Ruta Motiejunaite Christoph Jüschke Philip C. Dishuck Katharina Lahl Mohieddin Jafari Sara Aibar Apostolos Zaravinos Linda H. Steenhuizen Lindsey R. Allison Pablo Gamallo Fernando de Andres Segura Tyler Dae Devlin Vicente Pérez-García Avi Ma’ayan |
| author_facet |
Zichen Wang Caroline D. Monteiro Kathleen M. Jagodnik Nicolas F. Fernandez Gregory W. Gundersen Andrew D. Rouillard Sherry L. Jenkins Axel S. Feldmann Kevin S. Hu Michael G. McDermott Qiaonan Duan Neil R. Clark Matthew R. Jones Yan Kou Troy Goff Holly Woodland Fabio M R. Amaral Gregory L. Szeto Oliver Fuchs Sophia M. Schüssler-Fiorenza Rose Shvetank Sharma Uwe Schwartz Xabier Bengoetxea Bausela Maciej Szymkiewicz Vasileios Maroulis Anton Salykin Carolina M. Barra Candice D. Kruth Nicholas J. Bongio Vaibhav Mathur Radmila D Todoric Udi E. Rubin Apostolos Malatras Carl T. Fulp John A. Galindo Ruta Motiejunaite Christoph Jüschke Philip C. Dishuck Katharina Lahl Mohieddin Jafari Sara Aibar Apostolos Zaravinos Linda H. Steenhuizen Lindsey R. Allison Pablo Gamallo Fernando de Andres Segura Tyler Dae Devlin Vicente Pérez-García Avi Ma’ayan |
| author_sort |
Zichen Wang |
| title |
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| title_short |
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| title_full |
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| title_fullStr |
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| title_full_unstemmed |
Extraction and analysis of signatures from the Gene Expression Omnibus by the crowd |
| title_sort |
extraction and analysis of signatures from the gene expression omnibus by the crowd |
| publisher |
Nature Portfolio |
| publishDate |
2016 |
| url |
https://doaj.org/article/a8f2b28d890e4a0e99fc75b9634da8c0 |
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