Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae

Abstract In oligotrophic waters, cnidarian hosts rely on symbiosis with their photosynthetic dinoflagellate partners (family Symbiodiniaceae) to obtain the nutrients they need to grow, reproduce and survive. For this symbiosis to persist, the host must regulate the growth and proliferation of its sy...

Descripción completa

Guardado en:
Detalles Bibliográficos
Autores principales: Lucy M. Gorman, Shaun P. Wilkinson, Sheila A. Kitchen, Clinton A. Oakley, Arthur R. Grossman, Virginia M. Weis, Simon K. Davy
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2020
Materias:
R
Q
Acceso en línea:https://doaj.org/article/aa0b4312c85547bc828b55fda294d785
Etiquetas: Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
id oai:doaj.org-article:aa0b4312c85547bc828b55fda294d785
record_format dspace
spelling oai:doaj.org-article:aa0b4312c85547bc828b55fda294d7852021-12-02T15:10:31ZPhylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae10.1038/s41598-020-76621-12045-2322https://doaj.org/article/aa0b4312c85547bc828b55fda294d7852020-11-01T00:00:00Zhttps://doi.org/10.1038/s41598-020-76621-1https://doaj.org/toc/2045-2322Abstract In oligotrophic waters, cnidarian hosts rely on symbiosis with their photosynthetic dinoflagellate partners (family Symbiodiniaceae) to obtain the nutrients they need to grow, reproduce and survive. For this symbiosis to persist, the host must regulate the growth and proliferation of its symbionts. One of the proposed regulatory mechanisms is arrest of the symbiont cell cycle in the G1 phase, though the cellular mechanisms involved remain unknown. Cell-cycle progression in eukaryotes is controlled by the conserved family of cyclin-dependent kinases (CDKs) and their partner cyclins. We identified CDKs and cyclins in different Symbiodiniaceae species and examined their relationship to homologs in other eukaryotes. Cyclin proteins related to eumetazoan cell-cycle-related cyclins A, B, D, G/I and Y, and transcriptional cyclin L, were identified in the Symbiodiniaceae, alongside several alveolate-specific cyclin A/B proteins, and proteins related to protist P/U-type cyclins and apicomplexan cyclins. The largest expansion of Symbiodiniaceae cyclins was in the P/U-type cyclin groups. Proteins related to eumetazoan cell-cycle-related CDKs (CDK1) were identified as well as transcription-related CDKs. The largest expansion of CDK groups was, however, in alveolate-specific groups which comprised 11 distinct CDK groups (CDKA-J) with CDKB being the most widely distributed CDK protein. As a result of its phylogenetic position, conservation across Symbiodiniaceae species, and the presence of the canonical CDK motif, CDKB emerged as a likely candidate for a Saccharomyces cerevisiae Cdc28/Pho85-like homolog in Symbiodiniaceae. Similar to cyclins, two CDK-groups found in Symbiodiniaceae species were solely associated with apicomplexan taxa. A comparison of Breviolum minutum CDK and cyclin gene expression between free-living and symbiotic states showed that several alveolate-specific CDKs and two P/U-type cyclins exhibited altered expression in hospite, suggesting that symbiosis influences the cell cycle of symbionts on a molecular level. These results highlight the divergence of Symbiodiniaceae cell-cycle proteins across species. These results have important implications for host control of the symbiont cell cycle in novel cnidarian–dinoflagellate symbioses.Lucy M. GormanShaun P. WilkinsonSheila A. KitchenClinton A. OakleyArthur R. GrossmanVirginia M. WeisSimon K. DavyNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 10, Iss 1, Pp 1-13 (2020)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Lucy M. Gorman
Shaun P. Wilkinson
Sheila A. Kitchen
Clinton A. Oakley
Arthur R. Grossman
Virginia M. Weis
Simon K. Davy
Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
description Abstract In oligotrophic waters, cnidarian hosts rely on symbiosis with their photosynthetic dinoflagellate partners (family Symbiodiniaceae) to obtain the nutrients they need to grow, reproduce and survive. For this symbiosis to persist, the host must regulate the growth and proliferation of its symbionts. One of the proposed regulatory mechanisms is arrest of the symbiont cell cycle in the G1 phase, though the cellular mechanisms involved remain unknown. Cell-cycle progression in eukaryotes is controlled by the conserved family of cyclin-dependent kinases (CDKs) and their partner cyclins. We identified CDKs and cyclins in different Symbiodiniaceae species and examined their relationship to homologs in other eukaryotes. Cyclin proteins related to eumetazoan cell-cycle-related cyclins A, B, D, G/I and Y, and transcriptional cyclin L, were identified in the Symbiodiniaceae, alongside several alveolate-specific cyclin A/B proteins, and proteins related to protist P/U-type cyclins and apicomplexan cyclins. The largest expansion of Symbiodiniaceae cyclins was in the P/U-type cyclin groups. Proteins related to eumetazoan cell-cycle-related CDKs (CDK1) were identified as well as transcription-related CDKs. The largest expansion of CDK groups was, however, in alveolate-specific groups which comprised 11 distinct CDK groups (CDKA-J) with CDKB being the most widely distributed CDK protein. As a result of its phylogenetic position, conservation across Symbiodiniaceae species, and the presence of the canonical CDK motif, CDKB emerged as a likely candidate for a Saccharomyces cerevisiae Cdc28/Pho85-like homolog in Symbiodiniaceae. Similar to cyclins, two CDK-groups found in Symbiodiniaceae species were solely associated with apicomplexan taxa. A comparison of Breviolum minutum CDK and cyclin gene expression between free-living and symbiotic states showed that several alveolate-specific CDKs and two P/U-type cyclins exhibited altered expression in hospite, suggesting that symbiosis influences the cell cycle of symbionts on a molecular level. These results highlight the divergence of Symbiodiniaceae cell-cycle proteins across species. These results have important implications for host control of the symbiont cell cycle in novel cnidarian–dinoflagellate symbioses.
format article
author Lucy M. Gorman
Shaun P. Wilkinson
Sheila A. Kitchen
Clinton A. Oakley
Arthur R. Grossman
Virginia M. Weis
Simon K. Davy
author_facet Lucy M. Gorman
Shaun P. Wilkinson
Sheila A. Kitchen
Clinton A. Oakley
Arthur R. Grossman
Virginia M. Weis
Simon K. Davy
author_sort Lucy M. Gorman
title Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
title_short Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
title_full Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
title_fullStr Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
title_full_unstemmed Phylogenetic analysis of cell-cycle regulatory proteins within the Symbiodiniaceae
title_sort phylogenetic analysis of cell-cycle regulatory proteins within the symbiodiniaceae
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/aa0b4312c85547bc828b55fda294d785
work_keys_str_mv AT lucymgorman phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT shaunpwilkinson phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT sheilaakitchen phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT clintonaoakley phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT arthurrgrossman phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT virginiamweis phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
AT simonkdavy phylogeneticanalysisofcellcycleregulatoryproteinswithinthesymbiodiniaceae
_version_ 1718387710462263296