A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae

The authors set out to identify binding motifs for all 301 transcription factors of a plant pathogenic bacterium, Pseudomonas syringae, using HT-SELEX. They successfully identify binding motifs for 100 transcription factors, infer their binding sites on the genome, and validate the predicted interac...

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Autores principales:	Ligang Fan, Tingting Wang, Canfeng Hua, Wenju Sun, Xiaoyu Li, Lucas Grunwald, Jingui Liu, Nan Wu, Xiaolong Shao, Yimeng Yin, Jian Yan, Xin Deng
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2020
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/ace3247a1a494993b36c4e7a3397c27a
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spelling	oai:doaj.org-article:ace3247a1a494993b36c4e7a3397c27a2021-12-02T17:37:31ZA compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae10.1038/s41467-020-18744-72041-1723https://doaj.org/article/ace3247a1a494993b36c4e7a3397c27a2020-10-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-18744-7https://doaj.org/toc/2041-1723The authors set out to identify binding motifs for all 301 transcription factors of a plant pathogenic bacterium, Pseudomonas syringae, using HT-SELEX. They successfully identify binding motifs for 100 transcription factors, infer their binding sites on the genome, and validate the predicted interactions and functions.Ligang FanTingting WangCanfeng HuaWenju SunXiaoyu LiLucas GrunwaldJingui LiuNan WuXiaolong ShaoYimeng YinJian YanXin DengNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-11 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Ligang Fan Tingting Wang Canfeng Hua Wenju Sun Xiaoyu Li Lucas Grunwald Jingui Liu Nan Wu Xiaolong Shao Yimeng Yin Jian Yan Xin Deng A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
description	The authors set out to identify binding motifs for all 301 transcription factors of a plant pathogenic bacterium, Pseudomonas syringae, using HT-SELEX. They successfully identify binding motifs for 100 transcription factors, infer their binding sites on the genome, and validate the predicted interactions and functions.
format	article
author	Ligang Fan Tingting Wang Canfeng Hua Wenju Sun Xiaoyu Li Lucas Grunwald Jingui Liu Nan Wu Xiaolong Shao Yimeng Yin Jian Yan Xin Deng
author_facet	Ligang Fan Tingting Wang Canfeng Hua Wenju Sun Xiaoyu Li Lucas Grunwald Jingui Liu Nan Wu Xiaolong Shao Yimeng Yin Jian Yan Xin Deng
author_sort	Ligang Fan
title	A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
title_short	A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
title_full	A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
title_fullStr	A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
title_full_unstemmed	A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae
title_sort	compendium of dna-binding specificities of transcription factors in pseudomonas syringae
publisher	Nature Portfolio
publishDate	2020
url	https://doaj.org/article/ace3247a1a494993b36c4e7a3397c27a
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A compendium of DNA-binding specificities of transcription factors in Pseudomonas syringae

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