A dynamical framework for complex fractional killing

Abstract When chemotherapy drugs are applied to tumor cells with the same or similar genotypes, some cells are killed, while others survive. This fractional killing contributes to drug resistance in cancer. Through an incoherent feedforward loop, chemotherapy drugs not only activate p53 to induce ce...

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Autores principales: Richard Ballweg, Andrew L. Paek, Tongli Zhang
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2017
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Acceso en línea:https://doaj.org/article/ae89e0aee4dd4bcc96569fe1115175e6
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spelling oai:doaj.org-article:ae89e0aee4dd4bcc96569fe1115175e62021-12-02T11:52:20ZA dynamical framework for complex fractional killing10.1038/s41598-017-07422-22045-2322https://doaj.org/article/ae89e0aee4dd4bcc96569fe1115175e62017-08-01T00:00:00Zhttps://doi.org/10.1038/s41598-017-07422-2https://doaj.org/toc/2045-2322Abstract When chemotherapy drugs are applied to tumor cells with the same or similar genotypes, some cells are killed, while others survive. This fractional killing contributes to drug resistance in cancer. Through an incoherent feedforward loop, chemotherapy drugs not only activate p53 to induce cell death, but also promote the expression of apoptosis inhibitors which inhibit cell death. Consequently, cells in which p53 is activated early undergo apoptosis while cells in which p53 is activated late survive. The incoherent feedforward loop and the essential role of p53 activation timing makes fractional killing a complex dynamical challenge, which is hard to understand with intuition alone. To better understand this process, we have constructed a representative model by integrating the control of apoptosis with the relevant signaling pathways. After the model was trained to recapture the observed properties of fractional killing, it was analyzed with nonlinear dynamical tools. The analysis suggested a simple dynamical framework for fractional killing, which predicts that cell fate can be altered in three possible ways: alteration of bifurcation geometry, alteration of cell trajectories, or both. These predicted categories can explain existing strategies known to combat fractional killing and facilitate the design of novel strategies.Richard BallwegAndrew L. PaekTongli ZhangNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 7, Iss 1, Pp 1-12 (2017)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Richard Ballweg
Andrew L. Paek
Tongli Zhang
A dynamical framework for complex fractional killing
description Abstract When chemotherapy drugs are applied to tumor cells with the same or similar genotypes, some cells are killed, while others survive. This fractional killing contributes to drug resistance in cancer. Through an incoherent feedforward loop, chemotherapy drugs not only activate p53 to induce cell death, but also promote the expression of apoptosis inhibitors which inhibit cell death. Consequently, cells in which p53 is activated early undergo apoptosis while cells in which p53 is activated late survive. The incoherent feedforward loop and the essential role of p53 activation timing makes fractional killing a complex dynamical challenge, which is hard to understand with intuition alone. To better understand this process, we have constructed a representative model by integrating the control of apoptosis with the relevant signaling pathways. After the model was trained to recapture the observed properties of fractional killing, it was analyzed with nonlinear dynamical tools. The analysis suggested a simple dynamical framework for fractional killing, which predicts that cell fate can be altered in three possible ways: alteration of bifurcation geometry, alteration of cell trajectories, or both. These predicted categories can explain existing strategies known to combat fractional killing and facilitate the design of novel strategies.
format article
author Richard Ballweg
Andrew L. Paek
Tongli Zhang
author_facet Richard Ballweg
Andrew L. Paek
Tongli Zhang
author_sort Richard Ballweg
title A dynamical framework for complex fractional killing
title_short A dynamical framework for complex fractional killing
title_full A dynamical framework for complex fractional killing
title_fullStr A dynamical framework for complex fractional killing
title_full_unstemmed A dynamical framework for complex fractional killing
title_sort dynamical framework for complex fractional killing
publisher Nature Portfolio
publishDate 2017
url https://doaj.org/article/ae89e0aee4dd4bcc96569fe1115175e6
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AT tonglizhang adynamicalframeworkforcomplexfractionalkilling
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AT andrewlpaek dynamicalframeworkforcomplexfractionalkilling
AT tonglizhang dynamicalframeworkforcomplexfractionalkilling
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