Semi-automatic in silico gap closure enabled de novo assembly of two Dehalobacter genomes from metagenomic data.
Typically, the assembly and closure of a complete bacterial genome requires substantial additional effort spent in a wet lab for gap resolution and genome polishing. Assembly is further confounded by subspecies polymorphism when starting from metagenome sequence data. In this paper, we describe an i...
Guardado en:
Autores principales: | Shuiquan Tang, Yunchen Gong, Elizabeth A Edwards |
---|---|
Formato: | article |
Lenguaje: | EN |
Publicado: |
Public Library of Science (PLoS)
2012
|
Materias: | |
Acceso en línea: | https://doaj.org/article/aebf233e92b9400992ff53597db26e27 |
Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
Ejemplares similares
-
De novo assembly and functional annotation of blood transcriptome of loggerhead turtle, and in silico characterization of peroxiredoxins and thioredoxins
por: Javier Hernández-Fernández, et al.
Publicado: (2021) -
Band gap closure, incommensurability and molecular dissociation of dense chlorine
por: Philip Dalladay-Simpson, et al.
Publicado: (2019) -
Metagenomic <italic toggle="yes">De Novo</italic> Assembly of an Aquatic Representative of the Verrucomicrobial Class <italic toggle="yes">Spartobacteria</italic>
por: Daniel P. R. Herlemann, et al.
Publicado: (2013) -
Platanus-allee is a de novo haplotype assembler enabling a comprehensive access to divergent heterozygous regions
por: Rei Kajitani, et al.
Publicado: (2019) -
Regionalized tissue fluidization is required for epithelial gap closure during insect gastrulation
por: Akanksha Jain, et al.
Publicado: (2020)