Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra

Fitmawati, Hayati I, Sofiyanti N. 2016. Using ITS as a molecular marker for Mangifera species identification in Central Sumatra. Biodiversitas 17: 653-656. The relationship among Mangifera species in Central Sumatra is currently unclear. Previous molecular studies on these taxa using cpDNA were unab...

Descripción completa

Guardado en:

Detalles Bibliográficos
Autores principales:	FITMAWATI FITMAWATI, IBNA HAYATI, NERY SOFIYANTI
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2016
Materias:	central sumatra, its, mangifera, molecular marker, phylogenetic analyses Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/afb713d1889945df877e1e4b6f5251e2
Etiquetas:	Agregar Etiqueta Sin Etiquetas, Sea el primero en etiquetar este registro!

id	oai:doaj.org-article:afb713d1889945df877e1e4b6f5251e2
record_format	dspace
spelling	oai:doaj.org-article:afb713d1889945df877e1e4b6f5251e22021-11-14T02:27:09ZShort Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra1412-033X2085-472210.13057/biodiv/d170238https://doaj.org/article/afb713d1889945df877e1e4b6f5251e22016-08-01T00:00:00Zhttps://smujo.id/biodiv/article/view/341https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Fitmawati, Hayati I, Sofiyanti N. 2016. Using ITS as a molecular marker for Mangifera species identification in Central Sumatra. Biodiversitas 17: 653-656. The relationship among Mangifera species in Central Sumatra is currently unclear. Previous molecular studies on these taxa using cpDNA were unable to produce well-resolved phylogenetic trees. In this study, we explored the potential of the ITS sequences as molecular markers for Mangifera species to better resolve the phylogenetic analysis. Parsimony analysis revealed that the common ancestor M. quadrifida as the first species appeared in Central Sumatra. Mangifera sp. which assumed as new species had the longest genetic distance among species examined and may assumed as the most primitive species of Mangifera in Neighbor-Joining analysis. M. sumatrana and M. torquenda were closely related as well as M. foetida and M. odorata. Also, M. indica was closely related to M. kemanga. This finding and the other marker of cpDNA such as trnL-F and rbcL gene may suggest a possibility to revision in the latest Mangifera classification based on morphological character. Our results also revealed and support the genus Mangifera is a monophyletic group.FITMAWATI FITMAWATIIBNA HAYATINERY SOFIYANTIMBI & UNS Soloarticlecentral sumatra, its, mangifera, molecular marker, phylogenetic analysesBiology (General)QH301-705.5ENBiodiversitas, Vol 17, Iss 2 (2016)
institution	DOAJ
collection	DOAJ
language	EN
topic	central sumatra, its, mangifera, molecular marker, phylogenetic analyses Biology (General) QH301-705.5
spellingShingle	central sumatra, its, mangifera, molecular marker, phylogenetic analyses Biology (General) QH301-705.5 FITMAWATI FITMAWATI IBNA HAYATI NERY SOFIYANTI Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
description	Fitmawati, Hayati I, Sofiyanti N. 2016. Using ITS as a molecular marker for Mangifera species identification in Central Sumatra. Biodiversitas 17: 653-656. The relationship among Mangifera species in Central Sumatra is currently unclear. Previous molecular studies on these taxa using cpDNA were unable to produce well-resolved phylogenetic trees. In this study, we explored the potential of the ITS sequences as molecular markers for Mangifera species to better resolve the phylogenetic analysis. Parsimony analysis revealed that the common ancestor M. quadrifida as the first species appeared in Central Sumatra. Mangifera sp. which assumed as new species had the longest genetic distance among species examined and may assumed as the most primitive species of Mangifera in Neighbor-Joining analysis. M. sumatrana and M. torquenda were closely related as well as M. foetida and M. odorata. Also, M. indica was closely related to M. kemanga. This finding and the other marker of cpDNA such as trnL-F and rbcL gene may suggest a possibility to revision in the latest Mangifera classification based on morphological character. Our results also revealed and support the genus Mangifera is a monophyletic group.
format	article
author	FITMAWATI FITMAWATI IBNA HAYATI NERY SOFIYANTI
author_facet	FITMAWATI FITMAWATI IBNA HAYATI NERY SOFIYANTI
author_sort	FITMAWATI FITMAWATI
title	Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
title_short	Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
title_full	Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
title_fullStr	Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
title_full_unstemmed	Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra
title_sort	short communication: using its as a molecular marker for mangifera species identification in central sumatra
publisher	MBI & UNS Solo
publishDate	2016
url	https://doaj.org/article/afb713d1889945df877e1e4b6f5251e2
work_keys_str_mv	AT fitmawatifitmawati shortcommunicationusingitsasamolecularmarkerformangiferaspeciesidentificationincentralsumatra AT ibnahayati shortcommunicationusingitsasamolecularmarkerformangiferaspeciesidentificationincentralsumatra AT nerysofiyanti shortcommunicationusingitsasamolecularmarkerformangiferaspeciesidentificationincentralsumatra
_version_	1718430036418101248

Short Communication: Using ITS as a molecular marker for Mangifera species identification in Central Sumatra

Ejemplares similares