Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.

In this paper we introduce a system of partial differential equations that is capable of modeling a variety of dynamic processes in soft tissue cellular populations and their microenvironments. The model is designed to be general enough to simulate such processes as tissue regeneration, tumor growth...

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Autores principales: Gregory Baramidze, Victoria Baramidze, Ying Xu
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Lenguaje:EN
Publicado: Public Library of Science (PLoS) 2021
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Acceso en línea:https://doaj.org/article/b2e8e3d4997945ffb3813378af5c1c42
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spelling oai:doaj.org-article:b2e8e3d4997945ffb3813378af5c1c422021-12-02T20:12:53ZMathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.1932-620310.1371/journal.pone.0260108https://doaj.org/article/b2e8e3d4997945ffb3813378af5c1c422021-01-01T00:00:00Zhttps://doi.org/10.1371/journal.pone.0260108https://doaj.org/toc/1932-6203In this paper we introduce a system of partial differential equations that is capable of modeling a variety of dynamic processes in soft tissue cellular populations and their microenvironments. The model is designed to be general enough to simulate such processes as tissue regeneration, tumor growth, immune response, and many more. It also has built-in flexibility to include multiple chemical fields and/or sub-populations of cells, interstitial fluid and/or extracellular matrix. The model is derived from the conservation laws for mass and linear momentum and therefore can be classified as a continuum multi-phase model. A careful choice of state variables provides stability in solving the system of discretized equations defining advective flux terms. A concept of deviation from normal allows us to use simplified constitutive relations for stresses. We also present an algorithm for computing numerical approximations to the solutions of the system and discuss properties of these approximations. We demonstrate several examples of applications of the model. Numerical simulations show a significant potential of the model for simulating a variety of processes in soft tissues.Gregory BaramidzeVictoria BaramidzeYing XuPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 16, Iss 11, p e0260108 (2021)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Gregory Baramidze
Victoria Baramidze
Ying Xu
Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
description In this paper we introduce a system of partial differential equations that is capable of modeling a variety of dynamic processes in soft tissue cellular populations and their microenvironments. The model is designed to be general enough to simulate such processes as tissue regeneration, tumor growth, immune response, and many more. It also has built-in flexibility to include multiple chemical fields and/or sub-populations of cells, interstitial fluid and/or extracellular matrix. The model is derived from the conservation laws for mass and linear momentum and therefore can be classified as a continuum multi-phase model. A careful choice of state variables provides stability in solving the system of discretized equations defining advective flux terms. A concept of deviation from normal allows us to use simplified constitutive relations for stresses. We also present an algorithm for computing numerical approximations to the solutions of the system and discuss properties of these approximations. We demonstrate several examples of applications of the model. Numerical simulations show a significant potential of the model for simulating a variety of processes in soft tissues.
format article
author Gregory Baramidze
Victoria Baramidze
Ying Xu
author_facet Gregory Baramidze
Victoria Baramidze
Ying Xu
author_sort Gregory Baramidze
title Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
title_short Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
title_full Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
title_fullStr Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
title_full_unstemmed Mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
title_sort mathematical model and computational scheme for multi-phase modeling of cellular population and microenvironmental dynamics in soft tissue.
publisher Public Library of Science (PLoS)
publishDate 2021
url https://doaj.org/article/b2e8e3d4997945ffb3813378af5c1c42
work_keys_str_mv AT gregorybaramidze mathematicalmodelandcomputationalschemeformultiphasemodelingofcellularpopulationandmicroenvironmentaldynamicsinsofttissue
AT victoriabaramidze mathematicalmodelandcomputationalschemeformultiphasemodelingofcellularpopulationandmicroenvironmentaldynamicsinsofttissue
AT yingxu mathematicalmodelandcomputationalschemeformultiphasemodelingofcellularpopulationandmicroenvironmentaldynamicsinsofttissue
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