A Bayesian mixture model for the analysis of allelic expression in single cells

Allele-specific expression at single-cell resolution can reveal stochastic and dynamic features of gene expression in greater detail. The authors propose scBASE, a soft zero-and-one inflated model that improves estimation of cellular allelic proportions by pooling information across cells.

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Autores principales: Kwangbom Choi, Narayanan Raghupathy, Gary A. Churchill
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2019
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Acceso en línea:https://doaj.org/article/b3986d791d71404d99354a6093a9a7be
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spelling oai:doaj.org-article:b3986d791d71404d99354a6093a9a7be2021-12-02T16:58:16ZA Bayesian mixture model for the analysis of allelic expression in single cells10.1038/s41467-019-13099-02041-1723https://doaj.org/article/b3986d791d71404d99354a6093a9a7be2019-11-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-13099-0https://doaj.org/toc/2041-1723Allele-specific expression at single-cell resolution can reveal stochastic and dynamic features of gene expression in greater detail. The authors propose scBASE, a soft zero-and-one inflated model that improves estimation of cellular allelic proportions by pooling information across cells.Kwangbom ChoiNarayanan RaghupathyGary A. ChurchillNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-11 (2019)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Kwangbom Choi
Narayanan Raghupathy
Gary A. Churchill
A Bayesian mixture model for the analysis of allelic expression in single cells
description Allele-specific expression at single-cell resolution can reveal stochastic and dynamic features of gene expression in greater detail. The authors propose scBASE, a soft zero-and-one inflated model that improves estimation of cellular allelic proportions by pooling information across cells.
format article
author Kwangbom Choi
Narayanan Raghupathy
Gary A. Churchill
author_facet Kwangbom Choi
Narayanan Raghupathy
Gary A. Churchill
author_sort Kwangbom Choi
title A Bayesian mixture model for the analysis of allelic expression in single cells
title_short A Bayesian mixture model for the analysis of allelic expression in single cells
title_full A Bayesian mixture model for the analysis of allelic expression in single cells
title_fullStr A Bayesian mixture model for the analysis of allelic expression in single cells
title_full_unstemmed A Bayesian mixture model for the analysis of allelic expression in single cells
title_sort bayesian mixture model for the analysis of allelic expression in single cells
publisher Nature Portfolio
publishDate 2019
url https://doaj.org/article/b3986d791d71404d99354a6093a9a7be
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AT garyachurchill abayesianmixturemodelfortheanalysisofallelicexpressioninsinglecells
AT kwangbomchoi bayesianmixturemodelfortheanalysisofallelicexpressioninsinglecells
AT narayananraghupathy bayesianmixturemodelfortheanalysisofallelicexpressioninsinglecells
AT garyachurchill bayesianmixturemodelfortheanalysisofallelicexpressioninsinglecells
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