Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis

Abiotic stress often causes a series of morphological, physiological, biochemical and molecular changes that affect plant growth, development and productivity. To cope with abiotic stresses, it is necessary to understand plant responses to stresses that disturb homeostatic equilibrium at the cellula...

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Autores principales:	Reena Rosy Thomas, M K Chandra Prakash, M Krishna Reddy, Sukhada Mohandas, Riaz Mahmood
Formato:	article
Lenguaje:	EN
Publicado:	Society for Promotion of Horticulture - Indian Institute of Horticultural Research 2013
Materias:	nucleoside diphosphate kinase (ndk) microsatellite abiotic stress solanaceae Plant culture SB1-1110
Acceso en línea:	https://doaj.org/article/b4fcce891e20467890b7a5756ca83258
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spelling	oai:doaj.org-article:b4fcce891e20467890b7a5756ca832582021-12-02T11:21:00ZMicrosatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis0973-354X2582-4899https://doaj.org/article/b4fcce891e20467890b7a5756ca832582013-12-01T00:00:00Zhttps://jhs.iihr.res.in/index.php/jhs/article/view/300https://doaj.org/toc/0973-354Xhttps://doaj.org/toc/2582-4899Abiotic stress often causes a series of morphological, physiological, biochemical and molecular changes that affect plant growth, development and productivity. To cope with abiotic stresses, it is necessary to understand plant responses to stresses that disturb homeostatic equilibrium at the cellular and molecular level. Genomic information on Capsicum annuum has been explored to identify microsatellite markers associated with abiotic stress tolerance and assign them to cognate functional groups related to specific stress responses. Several in silico methods have been used to identify simple sequence repeats associated with stress responsive gene candidates in Capsicum annuum. In this study, a microsatellite marker has been identified in Capsicum annuum associated with Nucleoside Diphosphate Kinase (NDK) having multiple environmental stress tolerance (oxidative, high temperature and salt stress) and which is also highly conserved in crops of Solanaceae. These are house-keeping enzymes that maintain intracellular levels of all nucleoside triphosphates (NTP) with the exception of adenosine triphosphate (ATP). These are also involved in phytochrome A response, UV-B signaling, auxin responses and oxidative stress signaling.Reena Rosy ThomasM K Chandra PrakashM Krishna ReddySukhada MohandasRiaz MahmoodSociety for Promotion of Horticulture - Indian Institute of Horticultural Researcharticlenucleoside diphosphate kinase (ndk)microsatelliteabiotic stresssolanaceaePlant cultureSB1-1110ENJournal of Horticultural Sciences, Vol 8, Iss 2, Pp 195-198 (2013)
institution	DOAJ
collection	DOAJ
language	EN
topic	nucleoside diphosphate kinase (ndk) microsatellite abiotic stress solanaceae Plant culture SB1-1110
spellingShingle	nucleoside diphosphate kinase (ndk) microsatellite abiotic stress solanaceae Plant culture SB1-1110 Reena Rosy Thomas M K Chandra Prakash M Krishna Reddy Sukhada Mohandas Riaz Mahmood Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
description	Abiotic stress often causes a series of morphological, physiological, biochemical and molecular changes that affect plant growth, development and productivity. To cope with abiotic stresses, it is necessary to understand plant responses to stresses that disturb homeostatic equilibrium at the cellular and molecular level. Genomic information on Capsicum annuum has been explored to identify microsatellite markers associated with abiotic stress tolerance and assign them to cognate functional groups related to specific stress responses. Several in silico methods have been used to identify simple sequence repeats associated with stress responsive gene candidates in Capsicum annuum. In this study, a microsatellite marker has been identified in Capsicum annuum associated with Nucleoside Diphosphate Kinase (NDK) having multiple environmental stress tolerance (oxidative, high temperature and salt stress) and which is also highly conserved in crops of Solanaceae. These are house-keeping enzymes that maintain intracellular levels of all nucleoside triphosphates (NTP) with the exception of adenosine triphosphate (ATP). These are also involved in phytochrome A response, UV-B signaling, auxin responses and oxidative stress signaling.
format	article
author	Reena Rosy Thomas M K Chandra Prakash M Krishna Reddy Sukhada Mohandas Riaz Mahmood
author_facet	Reena Rosy Thomas M K Chandra Prakash M Krishna Reddy Sukhada Mohandas Riaz Mahmood
author_sort	Reena Rosy Thomas
title	Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
title_short	Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
title_full	Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
title_fullStr	Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
title_full_unstemmed	Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis
title_sort	microsatellite identification in solanaceae crops associated with nucleoside diphosphate kinase (ndk) specific to abiotic stress tolerance through in silico analysis
publisher	Society for Promotion of Horticulture - Indian Institute of Horticultural Research
publishDate	2013
url	https://doaj.org/article/b4fcce891e20467890b7a5756ca83258
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Microsatellite Identification in Solanaceae Crops Associated with Nucleoside Diphosphate Kinase (NDK) Specific to Abiotic Stress Tolerance through in silico Analysis

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