K‐mer counting and curated libraries drive efficient annotation of repeats in plant genomes

Abstract The annotation of repetitive sequences within plant genomes can help in the interpretation of observed phenotypes. Moreover, repeat masking is required for tasks such as whole‐genome alignment, promoter analysis, or pangenome exploration. Although homology‐based annotation methods are compu...

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Bibliographic Details
Main Authors: Bruno Contreras‐Moreira, Carla V Filippi, Guy Naamati, Carlos García Girón, James E Allen, Paul Flicek
Format: article
Language:EN
Published: Wiley 2021
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Online Access:https://doaj.org/article/b532ac8f92da477eab4920c1f846cd9b
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