Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014
Abstract A study was conducted to investigate the circulation of HRSV subgroup B (HRSVB) in China in recent years. HRSVB sequences from 365 samples collected in 1991, 2004 and 2008–2014 in China, together with 332 Chinese HRSVB sequences obtained from GenBank were analyzed to determine the geographi...
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2017
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oai:doaj.org-article:ba99df31a03747eaa47edcba627e21e92021-12-02T15:05:04ZEmergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 201410.1038/s41598-017-17055-02045-2322https://doaj.org/article/ba99df31a03747eaa47edcba627e21e92017-12-01T00:00:00Zhttps://doi.org/10.1038/s41598-017-17055-0https://doaj.org/toc/2045-2322Abstract A study was conducted to investigate the circulation of HRSV subgroup B (HRSVB) in China in recent years. HRSVB sequences from 365 samples collected in 1991, 2004 and 2008–2014 in China, together with 332 Chinese HRSVB sequences obtained from GenBank were analyzed to determine the geographic and yearly distribution of HRSVB. Phylogenetic analysis revealed these HRSVB sequences clustered into 4 genotypes with different frequencies: BA (83%), CB1 (11%), SAB (3.0%) and GB3 (0.7%). Between 2005 and 2013, there was a co-circulation of BA and non-BA genotypes in China. Genotypes BA9 and BA10 were two of the main BA genotypes detected in this study. Genotype BA9 was first detected in China in 2006 and became the predominant HRSVB genotype circulating in China from 2008 to 2014. Three different lineages were detected for both genotypes BA9 and BA10. Time to the most recent common ancestor for genotypes BA9 and BA10 was estimated for years 1997 and 1996, respectively. Results of this study not only contribute to the understanding of the circulation pattern, but also the phylogenetic pattern and evolution of HRSVB in China from 1991 to 2014.Jinhua SongHuiling WangJing ShiAili CuiYanzhi HuangLiwei SunXingyu XiangChaofeng MaPengbo YuZifeng YangQi LiTeresa I. NgYan ZhangRongbo ZhangWenbo XuNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 7, Iss 1, Pp 1-10 (2017) |
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Medicine R Science Q Jinhua Song Huiling Wang Jing Shi Aili Cui Yanzhi Huang Liwei Sun Xingyu Xiang Chaofeng Ma Pengbo Yu Zifeng Yang Qi Li Teresa I. Ng Yan Zhang Rongbo Zhang Wenbo Xu Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| description |
Abstract A study was conducted to investigate the circulation of HRSV subgroup B (HRSVB) in China in recent years. HRSVB sequences from 365 samples collected in 1991, 2004 and 2008–2014 in China, together with 332 Chinese HRSVB sequences obtained from GenBank were analyzed to determine the geographic and yearly distribution of HRSVB. Phylogenetic analysis revealed these HRSVB sequences clustered into 4 genotypes with different frequencies: BA (83%), CB1 (11%), SAB (3.0%) and GB3 (0.7%). Between 2005 and 2013, there was a co-circulation of BA and non-BA genotypes in China. Genotypes BA9 and BA10 were two of the main BA genotypes detected in this study. Genotype BA9 was first detected in China in 2006 and became the predominant HRSVB genotype circulating in China from 2008 to 2014. Three different lineages were detected for both genotypes BA9 and BA10. Time to the most recent common ancestor for genotypes BA9 and BA10 was estimated for years 1997 and 1996, respectively. Results of this study not only contribute to the understanding of the circulation pattern, but also the phylogenetic pattern and evolution of HRSVB in China from 1991 to 2014. |
| format |
article |
| author |
Jinhua Song Huiling Wang Jing Shi Aili Cui Yanzhi Huang Liwei Sun Xingyu Xiang Chaofeng Ma Pengbo Yu Zifeng Yang Qi Li Teresa I. Ng Yan Zhang Rongbo Zhang Wenbo Xu |
| author_facet |
Jinhua Song Huiling Wang Jing Shi Aili Cui Yanzhi Huang Liwei Sun Xingyu Xiang Chaofeng Ma Pengbo Yu Zifeng Yang Qi Li Teresa I. Ng Yan Zhang Rongbo Zhang Wenbo Xu |
| author_sort |
Jinhua Song |
| title |
Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| title_short |
Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| title_full |
Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| title_fullStr |
Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| title_full_unstemmed |
Emergence of BA9 genotype of human respiratory syncytial virus subgroup B in China from 2006 to 2014 |
| title_sort |
emergence of ba9 genotype of human respiratory syncytial virus subgroup b in china from 2006 to 2014 |
| publisher |
Nature Portfolio |
| publishDate |
2017 |
| url |
https://doaj.org/article/ba99df31a03747eaa47edcba627e21e9 |
| work_keys_str_mv |
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