Strain profiling and epidemiology of bacterial species from metagenomic sequencing

Microbiota is often a complex mixture of multiple coexisting species and strains with high level of phenotypic and genomic variability. Here, Albanese and Donati develop StrainEst for estimating the number and identity of coexisting strains and their relative abundances in mixed metagenomic samples.

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Detalles Bibliográficos
Autores principales: Davide Albanese, Claudio Donati
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2017
Materias:
Q
Acceso en línea:https://doaj.org/article/bbdd0bfb3791437cb7966ed2a7f18272
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