Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants
Cellular heterogeneity can confound functional genomics analyses of bulk tissues. Here, Donovan et al. deconvolute bulk GTEx RNA-seq data utilizing scRNA-seq data from the Tabula Muris project and show the power of using cell populations in eQTL analyses to identify disease and cell-type-associated...
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Nature Portfolio
2020
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oai:doaj.org-article:bf4f52ec9de84c23838bce86931d7b442021-12-02T17:31:39ZCellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants10.1038/s41467-020-14561-02041-1723https://doaj.org/article/bf4f52ec9de84c23838bce86931d7b442020-02-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-14561-0https://doaj.org/toc/2041-1723Cellular heterogeneity can confound functional genomics analyses of bulk tissues. Here, Donovan et al. deconvolute bulk GTEx RNA-seq data utilizing scRNA-seq data from the Tabula Muris project and show the power of using cell populations in eQTL analyses to identify disease and cell-type-associated regulatory variants.Margaret K. R. DonovanAgnieszka D’Antonio-ChronowskaMatteo D’AntonioKelly A. FrazerNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-14 (2020) |
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Science Q Margaret K. R. Donovan Agnieszka D’Antonio-Chronowska Matteo D’Antonio Kelly A. Frazer Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
description |
Cellular heterogeneity can confound functional genomics analyses of bulk tissues. Here, Donovan et al. deconvolute bulk GTEx RNA-seq data utilizing scRNA-seq data from the Tabula Muris project and show the power of using cell populations in eQTL analyses to identify disease and cell-type-associated regulatory variants. |
format |
article |
author |
Margaret K. R. Donovan Agnieszka D’Antonio-Chronowska Matteo D’Antonio Kelly A. Frazer |
author_facet |
Margaret K. R. Donovan Agnieszka D’Antonio-Chronowska Matteo D’Antonio Kelly A. Frazer |
author_sort |
Margaret K. R. Donovan |
title |
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
title_short |
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
title_full |
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
title_fullStr |
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
title_full_unstemmed |
Cellular deconvolution of GTEx tissues powers discovery of disease and cell-type associated regulatory variants |
title_sort |
cellular deconvolution of gtex tissues powers discovery of disease and cell-type associated regulatory variants |
publisher |
Nature Portfolio |
publishDate |
2020 |
url |
https://doaj.org/article/bf4f52ec9de84c23838bce86931d7b44 |
work_keys_str_mv |
AT margaretkrdonovan cellulardeconvolutionofgtextissuespowersdiscoveryofdiseaseandcelltypeassociatedregulatoryvariants AT agnieszkadantoniochronowska cellulardeconvolutionofgtextissuespowersdiscoveryofdiseaseandcelltypeassociatedregulatoryvariants AT matteodantonio cellulardeconvolutionofgtextissuespowersdiscoveryofdiseaseandcelltypeassociatedregulatoryvariants AT kellyafrazer cellulardeconvolutionofgtextissuespowersdiscoveryofdiseaseandcelltypeassociatedregulatoryvariants |
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1718380577764147200 |