The genomic landscape of molecular responses to natural drought stress in Panicum hallii
Drought is a major factor limiting crop productivity. Here, via eQTL analysis and comparative genomics, the authors show compensatory evolution between trans-regulatory loci and transcription factor binding sites that shape the drought response networks in the model C4 grass Panicum hallii.
Guardado en:
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , |
---|---|
Formato: | article |
Lenguaje: | EN |
Publicado: |
Nature Portfolio
2018
|
Materias: | |
Acceso en línea: | https://doaj.org/article/bfe67d457c31498a862b03de2a70396c |
Etiquetas: |
Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
|
id |
oai:doaj.org-article:bfe67d457c31498a862b03de2a70396c |
---|---|
record_format |
dspace |
spelling |
oai:doaj.org-article:bfe67d457c31498a862b03de2a70396c2021-12-02T17:32:31ZThe genomic landscape of molecular responses to natural drought stress in Panicum hallii10.1038/s41467-018-07669-x2041-1723https://doaj.org/article/bfe67d457c31498a862b03de2a70396c2018-12-01T00:00:00Zhttps://doi.org/10.1038/s41467-018-07669-xhttps://doaj.org/toc/2041-1723Drought is a major factor limiting crop productivity. Here, via eQTL analysis and comparative genomics, the authors show compensatory evolution between trans-regulatory loci and transcription factor binding sites that shape the drought response networks in the model C4 grass Panicum hallii.John T. LovellJerry JenkinsDavid B. LowrySujan MamidiAvinash SreedasyamXiaoyu WengKerrie BarryJason BonnetteBrandon CampitelliChris DaumSean P. GordonBillie A. GouldAlbina KhasanovaAnna LipzenAlice MacQueenJuan Diego Palacio-MejíaChristopher PlottEugene V. ShakirovShengqiang ShuYuko YoshinagaMatt ZaneDave KudrnaJason D. TalagDaniel RokhsarJane GrimwoodJeremy SchmutzThomas E. JuengerNature PortfolioarticleScienceQENNature Communications, Vol 9, Iss 1, Pp 1-10 (2018) |
institution |
DOAJ |
collection |
DOAJ |
language |
EN |
topic |
Science Q |
spellingShingle |
Science Q John T. Lovell Jerry Jenkins David B. Lowry Sujan Mamidi Avinash Sreedasyam Xiaoyu Weng Kerrie Barry Jason Bonnette Brandon Campitelli Chris Daum Sean P. Gordon Billie A. Gould Albina Khasanova Anna Lipzen Alice MacQueen Juan Diego Palacio-Mejía Christopher Plott Eugene V. Shakirov Shengqiang Shu Yuko Yoshinaga Matt Zane Dave Kudrna Jason D. Talag Daniel Rokhsar Jane Grimwood Jeremy Schmutz Thomas E. Juenger The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
description |
Drought is a major factor limiting crop productivity. Here, via eQTL analysis and comparative genomics, the authors show compensatory evolution between trans-regulatory loci and transcription factor binding sites that shape the drought response networks in the model C4 grass Panicum hallii. |
format |
article |
author |
John T. Lovell Jerry Jenkins David B. Lowry Sujan Mamidi Avinash Sreedasyam Xiaoyu Weng Kerrie Barry Jason Bonnette Brandon Campitelli Chris Daum Sean P. Gordon Billie A. Gould Albina Khasanova Anna Lipzen Alice MacQueen Juan Diego Palacio-Mejía Christopher Plott Eugene V. Shakirov Shengqiang Shu Yuko Yoshinaga Matt Zane Dave Kudrna Jason D. Talag Daniel Rokhsar Jane Grimwood Jeremy Schmutz Thomas E. Juenger |
author_facet |
John T. Lovell Jerry Jenkins David B. Lowry Sujan Mamidi Avinash Sreedasyam Xiaoyu Weng Kerrie Barry Jason Bonnette Brandon Campitelli Chris Daum Sean P. Gordon Billie A. Gould Albina Khasanova Anna Lipzen Alice MacQueen Juan Diego Palacio-Mejía Christopher Plott Eugene V. Shakirov Shengqiang Shu Yuko Yoshinaga Matt Zane Dave Kudrna Jason D. Talag Daniel Rokhsar Jane Grimwood Jeremy Schmutz Thomas E. Juenger |
author_sort |
John T. Lovell |
title |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
title_short |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
title_full |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
title_fullStr |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
title_full_unstemmed |
The genomic landscape of molecular responses to natural drought stress in Panicum hallii |
title_sort |
genomic landscape of molecular responses to natural drought stress in panicum hallii |
publisher |
Nature Portfolio |
publishDate |
2018 |
url |
https://doaj.org/article/bfe67d457c31498a862b03de2a70396c |
work_keys_str_mv |
AT johntlovell thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jerryjenkins thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT davidblowry thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT sujanmamidi thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT avinashsreedasyam thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT xiaoyuweng thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT kerriebarry thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jasonbonnette thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT brandoncampitelli thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT chrisdaum thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT seanpgordon thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT billieagould thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT albinakhasanova thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT annalipzen thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT alicemacqueen thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT juandiegopalaciomejia thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT christopherplott thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT eugenevshakirov thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT shengqiangshu thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT yukoyoshinaga thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT mattzane thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT davekudrna thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jasondtalag thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT danielrokhsar thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT janegrimwood thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jeremyschmutz thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT thomasejuenger thegenomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT johntlovell genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jerryjenkins genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT davidblowry genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT sujanmamidi genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT avinashsreedasyam genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT xiaoyuweng genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT kerriebarry genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jasonbonnette genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT brandoncampitelli genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT chrisdaum genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT seanpgordon genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT billieagould genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT albinakhasanova genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT annalipzen genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT alicemacqueen genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT juandiegopalaciomejia genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT christopherplott genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT eugenevshakirov genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT shengqiangshu genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT yukoyoshinaga genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT mattzane genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT davekudrna genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jasondtalag genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT danielrokhsar genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT janegrimwood genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT jeremyschmutz genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii AT thomasejuenger genomiclandscapeofmolecularresponsestonaturaldroughtstressinpanicumhallii |
_version_ |
1718380273491509248 |