SciBet as a portable and fast single cell type identifier

The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.

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Autores principales: Chenwei Li, Baolin Liu, Boxi Kang, Zedao Liu, Yedan Liu, Changya Chen, Xianwen Ren, Zemin Zhang
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2020
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Q
Acceso en línea:https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd
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spelling oai:doaj.org-article:c160ac1e1a1e4a25b0baef251f5258dd2021-12-02T17:32:28ZSciBet as a portable and fast single cell type identifier10.1038/s41467-020-15523-22041-1723https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd2020-04-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-15523-2https://doaj.org/toc/2041-1723The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.Chenwei LiBaolin LiuBoxi KangZedao LiuYedan LiuChangya ChenXianwen RenZemin ZhangNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-8 (2020)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Chenwei Li
Baolin Liu
Boxi Kang
Zedao Liu
Yedan Liu
Changya Chen
Xianwen Ren
Zemin Zhang
SciBet as a portable and fast single cell type identifier
description The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.
format article
author Chenwei Li
Baolin Liu
Boxi Kang
Zedao Liu
Yedan Liu
Changya Chen
Xianwen Ren
Zemin Zhang
author_facet Chenwei Li
Baolin Liu
Boxi Kang
Zedao Liu
Yedan Liu
Changya Chen
Xianwen Ren
Zemin Zhang
author_sort Chenwei Li
title SciBet as a portable and fast single cell type identifier
title_short SciBet as a portable and fast single cell type identifier
title_full SciBet as a portable and fast single cell type identifier
title_fullStr SciBet as a portable and fast single cell type identifier
title_full_unstemmed SciBet as a portable and fast single cell type identifier
title_sort scibet as a portable and fast single cell type identifier
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd
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AT yedanliu scibetasaportableandfastsinglecelltypeidentifier
AT changyachen scibetasaportableandfastsinglecelltypeidentifier
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