SciBet as a portable and fast single cell type identifier

The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.

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Autores principales:	Chenwei Li, Baolin Liu, Boxi Kang, Zedao Liu, Yedan Liu, Changya Chen, Xianwen Ren, Zemin Zhang
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2020
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd
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spelling	oai:doaj.org-article:c160ac1e1a1e4a25b0baef251f5258dd2021-12-02T17:32:28ZSciBet as a portable and fast single cell type identifier10.1038/s41467-020-15523-22041-1723https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd2020-04-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-15523-2https://doaj.org/toc/2041-1723The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.Chenwei LiBaolin LiuBoxi KangZedao LiuYedan LiuChangya ChenXianwen RenZemin ZhangNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-8 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Chenwei Li Baolin Liu Boxi Kang Zedao Liu Yedan Liu Changya Chen Xianwen Ren Zemin Zhang SciBet as a portable and fast single cell type identifier
description	The increasing size of single cell sequencing data sets calls for scalable cell annotation methods. Here, the authors introduce SciBet, which uses a multinomial distribution model and maximum likelihood estimation for fast and accurate single cell identification.
format	article
author	Chenwei Li Baolin Liu Boxi Kang Zedao Liu Yedan Liu Changya Chen Xianwen Ren Zemin Zhang
author_facet	Chenwei Li Baolin Liu Boxi Kang Zedao Liu Yedan Liu Changya Chen Xianwen Ren Zemin Zhang
author_sort	Chenwei Li
title	SciBet as a portable and fast single cell type identifier
title_short	SciBet as a portable and fast single cell type identifier
title_full	SciBet as a portable and fast single cell type identifier
title_fullStr	SciBet as a portable and fast single cell type identifier
title_full_unstemmed	SciBet as a portable and fast single cell type identifier
title_sort	scibet as a portable and fast single cell type identifier
publisher	Nature Portfolio
publishDate	2020
url	https://doaj.org/article/c160ac1e1a1e4a25b0baef251f5258dd
work_keys_str_mv	AT chenweili scibetasaportableandfastsinglecelltypeidentifier AT baolinliu scibetasaportableandfastsinglecelltypeidentifier AT boxikang scibetasaportableandfastsinglecelltypeidentifier AT zedaoliu scibetasaportableandfastsinglecelltypeidentifier AT yedanliu scibetasaportableandfastsinglecelltypeidentifier AT changyachen scibetasaportableandfastsinglecelltypeidentifier AT xianwenren scibetasaportableandfastsinglecelltypeidentifier AT zeminzhang scibetasaportableandfastsinglecelltypeidentifier
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SciBet as a portable and fast single cell type identifier

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