Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies

Abstract The gastrointestinal tract (GIT) health impacts animal productivity. The poultry microbiome has functions which range from protection against pathogens and nutrients production, to host immune system maturation. Fluctuations in the microbiome have also been linked to prevailing environmenta...

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Autores principales:	Christiana Eleojo Aruwa, Charlene Pillay, Martin M. Nyaga, Saheed Sabiu
Formato:	article
Lenguaje:	EN
Publicado:	BMC 2021
Materias:	Disease Environmental impacts Gut microbiome Microbiome engineering Poultry health Animal culture SF1-1100 Veterinary medicine SF600-1100
Acceso en línea:	https://doaj.org/article/c86e843f296046fb95f2e8da9892e73a
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spelling	oai:doaj.org-article:c86e843f296046fb95f2e8da9892e73a2021-12-05T12:21:05ZPoultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies10.1186/s40104-021-00640-92049-1891https://doaj.org/article/c86e843f296046fb95f2e8da9892e73a2021-12-01T00:00:00Zhttps://doi.org/10.1186/s40104-021-00640-9https://doaj.org/toc/2049-1891Abstract The gastrointestinal tract (GIT) health impacts animal productivity. The poultry microbiome has functions which range from protection against pathogens and nutrients production, to host immune system maturation. Fluctuations in the microbiome have also been linked to prevailing environmental conditions. Healthy poultry birds possess a natural resistance to infection. However, the exploration of environmental impacts and other relevant factors on poultry growth and health have been underplayed. Since good performance and growth rate are central to animal production, the host-microbiome relationship remains integral. Prior to the emergence of metagenomic techniques, conventional methods for poultry microbiome studies were used and were low-throughput and associated with insufficient genomic data and high cost of sequencing. Fortunately, the advent of high-throughput sequencing platforms have circumvented some of these shortfalls and paved the way for increased studies on the poultry gut microbiome diversity and functions. Here, we give an up-to-date review on the impact of varied environments on microbiome profile, as well as microbiome engineering and microbiome technology advancements. It is hoped that this paper will provide invaluable information that could guide and inspire further studies on the lingering pertinent questions about the poultry microbiome.Christiana Eleojo AruwaCharlene PillayMartin M. NyagaSaheed SabiuBMCarticleDiseaseEnvironmental impactsGut microbiomeMicrobiome engineeringPoultry healthAnimal cultureSF1-1100Veterinary medicineSF600-1100ENJournal of Animal Science and Biotechnology, Vol 12, Iss 1, Pp 1-15 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Disease Environmental impacts Gut microbiome Microbiome engineering Poultry health Animal culture SF1-1100 Veterinary medicine SF600-1100
spellingShingle	Disease Environmental impacts Gut microbiome Microbiome engineering Poultry health Animal culture SF1-1100 Veterinary medicine SF600-1100 Christiana Eleojo Aruwa Charlene Pillay Martin M. Nyaga Saheed Sabiu Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
description	Abstract The gastrointestinal tract (GIT) health impacts animal productivity. The poultry microbiome has functions which range from protection against pathogens and nutrients production, to host immune system maturation. Fluctuations in the microbiome have also been linked to prevailing environmental conditions. Healthy poultry birds possess a natural resistance to infection. However, the exploration of environmental impacts and other relevant factors on poultry growth and health have been underplayed. Since good performance and growth rate are central to animal production, the host-microbiome relationship remains integral. Prior to the emergence of metagenomic techniques, conventional methods for poultry microbiome studies were used and were low-throughput and associated with insufficient genomic data and high cost of sequencing. Fortunately, the advent of high-throughput sequencing platforms have circumvented some of these shortfalls and paved the way for increased studies on the poultry gut microbiome diversity and functions. Here, we give an up-to-date review on the impact of varied environments on microbiome profile, as well as microbiome engineering and microbiome technology advancements. It is hoped that this paper will provide invaluable information that could guide and inspire further studies on the lingering pertinent questions about the poultry microbiome.
format	article
author	Christiana Eleojo Aruwa Charlene Pillay Martin M. Nyaga Saheed Sabiu
author_facet	Christiana Eleojo Aruwa Charlene Pillay Martin M. Nyaga Saheed Sabiu
author_sort	Christiana Eleojo Aruwa
title	Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
title_short	Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
title_full	Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
title_fullStr	Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
title_full_unstemmed	Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
title_sort	poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies
publisher	BMC
publishDate	2021
url	https://doaj.org/article/c86e843f296046fb95f2e8da9892e73a
work_keys_str_mv	AT christianaeleojoaruwa poultryguthealthmicrobiomefunctionsenvironmentalimpactsmicrobiomeengineeringandadvancementsincharacterizationtechnologies AT charlenepillay poultryguthealthmicrobiomefunctionsenvironmentalimpactsmicrobiomeengineeringandadvancementsincharacterizationtechnologies AT martinmnyaga poultryguthealthmicrobiomefunctionsenvironmentalimpactsmicrobiomeengineeringandadvancementsincharacterizationtechnologies AT saheedsabiu poultryguthealthmicrobiomefunctionsenvironmentalimpactsmicrobiomeengineeringandadvancementsincharacterizationtechnologies
_version_	1718372042172006400

Poultry gut health – microbiome functions, environmental impacts, microbiome engineering and advancements in characterization technologies

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