Integrative analysis of reference epigenomes in 20 rice varieties

Integrative analysis of reference epigenomes in 20 rice varieties

Comprehensive epigenomic maps of various rice varieties are still unavailable. Here, the authors report the development of eChIP as a fast and low-input upgrade of regular plant ChIP-seq protocol for epigenome analysis of 20 rice varieties and annotate over 80% of the genome with different epigenome...

Descripción completa

Guardado en:
Detalles Bibliográficos
Autores principales: Lun Zhao, Liang Xie, Qing Zhang, Weizhi Ouyang, Li Deng, Pengpeng Guan, Meng Ma, Yue Li, Ying Zhang, Qin Xiao, Jingwen Zhang, Hongmeijuan Li, Shunyao Wang, Jiangwei Man, Zhilin Cao, Qinghua Zhang, Qifa Zhang, Guoliang Li, Xingwang Li
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2020
Materias:
Science
Q
Acceso en línea:https://doaj.org/article/cd5c598cf09a4d0785dee2d29f0835f7
Etiquetas: Agregar Etiqueta
Sin Etiquetas, Sea el primero en etiquetar este registro!
id oai:doaj.org-article:cd5c598cf09a4d0785dee2d29f0835f7
record_format dspace
spelling oai:doaj.org-article:cd5c598cf09a4d0785dee2d29f0835f72021-12-02T16:53:08ZIntegrative analysis of reference epigenomes in 20 rice varieties10.1038/s41467-020-16457-52041-1723https://doaj.org/article/cd5c598cf09a4d0785dee2d29f0835f72020-05-01T00:00:00Zhttps://doi.org/10.1038/s41467-020-16457-5https://doaj.org/toc/2041-1723Comprehensive epigenomic maps of various rice varieties are still unavailable. Here, the authors report the development of eChIP as a fast and low-input upgrade of regular plant ChIP-seq protocol for epigenome analysis of 20 rice varieties and annotate over 80% of the genome with different epigenome properties for transcriptional regulation.Lun ZhaoLiang XieQing ZhangWeizhi OuyangLi DengPengpeng GuanMeng MaYue LiYing ZhangQin XiaoJingwen ZhangHongmeijuan LiShunyao WangJiangwei ManZhilin CaoQinghua ZhangQifa ZhangGuoliang LiXingwang LiNature PortfolioarticleScienceQENNature Communications, Vol 11, Iss 1, Pp 1-16 (2020)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Lun Zhao
Liang Xie
Qing Zhang
Weizhi Ouyang
Li Deng
Pengpeng Guan
Meng Ma
Yue Li
Ying Zhang
Qin Xiao
Jingwen Zhang
Hongmeijuan Li
Shunyao Wang
Jiangwei Man
Zhilin Cao
Qinghua Zhang
Qifa Zhang
Guoliang Li
Xingwang Li
Integrative analysis of reference epigenomes in 20 rice varieties
description Comprehensive epigenomic maps of various rice varieties are still unavailable. Here, the authors report the development of eChIP as a fast and low-input upgrade of regular plant ChIP-seq protocol for epigenome analysis of 20 rice varieties and annotate over 80% of the genome with different epigenome properties for transcriptional regulation.
format article
author Lun Zhao
Liang Xie
Qing Zhang
Weizhi Ouyang
Li Deng
Pengpeng Guan
Meng Ma
Yue Li
Ying Zhang
Qin Xiao
Jingwen Zhang
Hongmeijuan Li
Shunyao Wang
Jiangwei Man
Zhilin Cao
Qinghua Zhang
Qifa Zhang
Guoliang Li
Xingwang Li
author_facet Lun Zhao
Liang Xie
Qing Zhang
Weizhi Ouyang
Li Deng
Pengpeng Guan
Meng Ma
Yue Li
Ying Zhang
Qin Xiao
Jingwen Zhang
Hongmeijuan Li
Shunyao Wang
Jiangwei Man
Zhilin Cao
Qinghua Zhang
Qifa Zhang
Guoliang Li
Xingwang Li
author_sort Lun Zhao
title Integrative analysis of reference epigenomes in 20 rice varieties
title_short Integrative analysis of reference epigenomes in 20 rice varieties
title_full Integrative analysis of reference epigenomes in 20 rice varieties
title_fullStr Integrative analysis of reference epigenomes in 20 rice varieties
title_full_unstemmed Integrative analysis of reference epigenomes in 20 rice varieties
title_sort integrative analysis of reference epigenomes in 20 rice varieties
publisher Nature Portfolio
publishDate 2020
url https://doaj.org/article/cd5c598cf09a4d0785dee2d29f0835f7
work_keys_str_mv AT lunzhao integrativeanalysisofreferenceepigenomesin20ricevarieties
AT liangxie integrativeanalysisofreferenceepigenomesin20ricevarieties
AT qingzhang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT weizhiouyang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT lideng integrativeanalysisofreferenceepigenomesin20ricevarieties
AT pengpengguan integrativeanalysisofreferenceepigenomesin20ricevarieties
AT mengma integrativeanalysisofreferenceepigenomesin20ricevarieties
AT yueli integrativeanalysisofreferenceepigenomesin20ricevarieties
AT yingzhang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT qinxiao integrativeanalysisofreferenceepigenomesin20ricevarieties
AT jingwenzhang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT hongmeijuanli integrativeanalysisofreferenceepigenomesin20ricevarieties
AT shunyaowang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT jiangweiman integrativeanalysisofreferenceepigenomesin20ricevarieties
AT zhilincao integrativeanalysisofreferenceepigenomesin20ricevarieties
AT qinghuazhang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT qifazhang integrativeanalysisofreferenceepigenomesin20ricevarieties
AT guoliangli integrativeanalysisofreferenceepigenomesin20ricevarieties
AT xingwangli integrativeanalysisofreferenceepigenomesin20ricevarieties
_version_ 1718382887690043392

Ejemplares similares