A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters

Abstract In humans, the H+-coupled Fe2+ transporter DMT1 (SLC11A2) is essential for proper maintenance of iron homeostasis. While X-ray diffraction has recently unveiled the structure of the bacterial homologue ScaDMT as a LeuT-fold transporter, the exact mechanism of H+-cotransport has remained elu...

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Autores principales: Jonai Pujol-Giménez, Matthias A. Hediger, Gergely Gyimesi
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Publicado: Nature Portfolio 2017
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Acceso en línea:https://doaj.org/article/cf2c702817c54f5998ccf3e24443a3dd
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spelling oai:doaj.org-article:cf2c702817c54f5998ccf3e24443a3dd2021-12-02T11:52:25ZA novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters10.1038/s41598-017-06446-y2045-2322https://doaj.org/article/cf2c702817c54f5998ccf3e24443a3dd2017-07-01T00:00:00Zhttps://doi.org/10.1038/s41598-017-06446-yhttps://doaj.org/toc/2045-2322Abstract In humans, the H+-coupled Fe2+ transporter DMT1 (SLC11A2) is essential for proper maintenance of iron homeostasis. While X-ray diffraction has recently unveiled the structure of the bacterial homologue ScaDMT as a LeuT-fold transporter, the exact mechanism of H+-cotransport has remained elusive. Here, we used a combination of molecular dynamics simulations, in silico pK a calculations and site-directed mutagenesis, followed by rigorous functional analysis, to discover two previously uncharacterized functionally relevant residues in hDMT1 that contribute to H+-coupling. E193 plays a central role in proton binding, thereby affecting transport properties and electrogenicity, while N472 likely coordinates the metal ion, securing an optimally “closed” state of the protein. Our molecular dynamics simulations provide insight into how H+-translocation through E193 is allosterically linked to intracellular gating, establishing a novel transport mechanism distinct from that of other H+-coupled transporters.Jonai Pujol-GiménezMatthias A. HedigerGergely GyimesiNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 7, Iss 1, Pp 1-17 (2017)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Jonai Pujol-Giménez
Matthias A. Hediger
Gergely Gyimesi
A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
description Abstract In humans, the H+-coupled Fe2+ transporter DMT1 (SLC11A2) is essential for proper maintenance of iron homeostasis. While X-ray diffraction has recently unveiled the structure of the bacterial homologue ScaDMT as a LeuT-fold transporter, the exact mechanism of H+-cotransport has remained elusive. Here, we used a combination of molecular dynamics simulations, in silico pK a calculations and site-directed mutagenesis, followed by rigorous functional analysis, to discover two previously uncharacterized functionally relevant residues in hDMT1 that contribute to H+-coupling. E193 plays a central role in proton binding, thereby affecting transport properties and electrogenicity, while N472 likely coordinates the metal ion, securing an optimally “closed” state of the protein. Our molecular dynamics simulations provide insight into how H+-translocation through E193 is allosterically linked to intracellular gating, establishing a novel transport mechanism distinct from that of other H+-coupled transporters.
format article
author Jonai Pujol-Giménez
Matthias A. Hediger
Gergely Gyimesi
author_facet Jonai Pujol-Giménez
Matthias A. Hediger
Gergely Gyimesi
author_sort Jonai Pujol-Giménez
title A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
title_short A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
title_full A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
title_fullStr A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
title_full_unstemmed A novel proton transfer mechanism in the SLC11 family of divalent metal ion transporters
title_sort novel proton transfer mechanism in the slc11 family of divalent metal ion transporters
publisher Nature Portfolio
publishDate 2017
url https://doaj.org/article/cf2c702817c54f5998ccf3e24443a3dd
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