Global analysis of lysine acetylation in soybean leaves

Abstract Protein lysine acetylation (Kac) is an important post-translational modification in both animal and plant cells. Global Kac identification has been performed at the proteomic level in various species. However, the study of Kac in oil and resource plant species is relatively limited. Soybean...

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Autores principales:	Geng Li, Bin Zheng, Wei Zhao, Tinghu Ren, Xinghui Zhang, Tangyuan Ning, Peng Liu
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2021
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/d025d81997ec472f99dbf0d97eb1e6cb
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spelling	oai:doaj.org-article:d025d81997ec472f99dbf0d97eb1e6cb2021-12-02T17:19:14ZGlobal analysis of lysine acetylation in soybean leaves10.1038/s41598-021-97338-92045-2322https://doaj.org/article/d025d81997ec472f99dbf0d97eb1e6cb2021-09-01T00:00:00Zhttps://doi.org/10.1038/s41598-021-97338-9https://doaj.org/toc/2045-2322Abstract Protein lysine acetylation (Kac) is an important post-translational modification in both animal and plant cells. Global Kac identification has been performed at the proteomic level in various species. However, the study of Kac in oil and resource plant species is relatively limited. Soybean is a globally important oil crop and resouce plant. In the present study, lysine acetylome analysis was performed in soybean leaves with proteomics techniques. Various bioinformatics analyses were performed to illustrate the structure and function of these Kac sites and proteins. Totally, 3148 acetylation sites in 1538 proteins were detected. Motif analysis of these Kac modified peptides extracted 17 conserved motifs. These Kac modified protein showed a wide subcellular location and functional distribution. Chloroplast is the primary subcellular location and cellular component where Kac proteins were localized. Function and pathways analyses indicated a plenty of biological processes and metabolism pathways potentially be influenced by Kac modification. Ribosome activity and protein biosynthesis, carbohydrate and energy metabolism, photosynthesis and fatty acid metabolism may be regulated by Kac modification in soybean leaves. Our study suggests Kac plays an important role in soybean physiology and biology, which is an available resource and reference of Kac function and structure characterization in oil crop and resource plant, as well as in plant kingdom.Geng LiBin ZhengWei ZhaoTinghu RenXinghui ZhangTangyuan NingPeng LiuNature PortfolioarticleMedicineRScienceQENScientific Reports, Vol 11, Iss 1, Pp 1-12 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Geng Li Bin Zheng Wei Zhao Tinghu Ren Xinghui Zhang Tangyuan Ning Peng Liu Global analysis of lysine acetylation in soybean leaves
description	Abstract Protein lysine acetylation (Kac) is an important post-translational modification in both animal and plant cells. Global Kac identification has been performed at the proteomic level in various species. However, the study of Kac in oil and resource plant species is relatively limited. Soybean is a globally important oil crop and resouce plant. In the present study, lysine acetylome analysis was performed in soybean leaves with proteomics techniques. Various bioinformatics analyses were performed to illustrate the structure and function of these Kac sites and proteins. Totally, 3148 acetylation sites in 1538 proteins were detected. Motif analysis of these Kac modified peptides extracted 17 conserved motifs. These Kac modified protein showed a wide subcellular location and functional distribution. Chloroplast is the primary subcellular location and cellular component where Kac proteins were localized. Function and pathways analyses indicated a plenty of biological processes and metabolism pathways potentially be influenced by Kac modification. Ribosome activity and protein biosynthesis, carbohydrate and energy metabolism, photosynthesis and fatty acid metabolism may be regulated by Kac modification in soybean leaves. Our study suggests Kac plays an important role in soybean physiology and biology, which is an available resource and reference of Kac function and structure characterization in oil crop and resource plant, as well as in plant kingdom.
format	article
author	Geng Li Bin Zheng Wei Zhao Tinghu Ren Xinghui Zhang Tangyuan Ning Peng Liu
author_facet	Geng Li Bin Zheng Wei Zhao Tinghu Ren Xinghui Zhang Tangyuan Ning Peng Liu
author_sort	Geng Li
title	Global analysis of lysine acetylation in soybean leaves
title_short	Global analysis of lysine acetylation in soybean leaves
title_full	Global analysis of lysine acetylation in soybean leaves
title_fullStr	Global analysis of lysine acetylation in soybean leaves
title_full_unstemmed	Global analysis of lysine acetylation in soybean leaves
title_sort	global analysis of lysine acetylation in soybean leaves
publisher	Nature Portfolio
publishDate	2021
url	https://doaj.org/article/d025d81997ec472f99dbf0d97eb1e6cb
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_version_	1718381112102748160

Global analysis of lysine acetylation in soybean leaves

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