Mining biological pathways using WikiPathways web services.

WikiPathways is a platform for creating, updating, and sharing biological pathways [1]. Pathways can be edited and downloaded using the wiki-style website. Here we present a SOAP web service that provides programmatic access to WikiPathways that is complementary to the website. We describe the funct...

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Autores principales:	Thomas Kelder, Alexander R Pico, Kristina Hanspers, Martijn P van Iersel, Chris Evelo, Bruce R Conklin
Formato:	article
Lenguaje:	EN
Publicado:	Public Library of Science (PLoS) 2009
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/d26135ccf4444b89931d591aec6ac7a5
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id	oai:doaj.org-article:d26135ccf4444b89931d591aec6ac7a5
record_format	dspace
spelling	oai:doaj.org-article:d26135ccf4444b89931d591aec6ac7a52021-11-25T06:21:19ZMining biological pathways using WikiPathways web services.1932-620310.1371/journal.pone.0006447https://doaj.org/article/d26135ccf4444b89931d591aec6ac7a52009-07-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/19649250/?tool=EBIhttps://doaj.org/toc/1932-6203WikiPathways is a platform for creating, updating, and sharing biological pathways [1]. Pathways can be edited and downloaded using the wiki-style website. Here we present a SOAP web service that provides programmatic access to WikiPathways that is complementary to the website. We describe the functionality that this web service offers and discuss several use cases in detail. Exposing WikiPathways through a web service opens up new ways of utilizing pathway information and assisting the community curation process.Thomas KelderAlexander R PicoKristina HanspersMartijn P van IerselChris EveloBruce R ConklinPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 4, Iss 7, p e6447 (2009)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Thomas Kelder Alexander R Pico Kristina Hanspers Martijn P van Iersel Chris Evelo Bruce R Conklin Mining biological pathways using WikiPathways web services.
description	WikiPathways is a platform for creating, updating, and sharing biological pathways [1]. Pathways can be edited and downloaded using the wiki-style website. Here we present a SOAP web service that provides programmatic access to WikiPathways that is complementary to the website. We describe the functionality that this web service offers and discuss several use cases in detail. Exposing WikiPathways through a web service opens up new ways of utilizing pathway information and assisting the community curation process.
format	article
author	Thomas Kelder Alexander R Pico Kristina Hanspers Martijn P van Iersel Chris Evelo Bruce R Conklin
author_facet	Thomas Kelder Alexander R Pico Kristina Hanspers Martijn P van Iersel Chris Evelo Bruce R Conklin
author_sort	Thomas Kelder
title	Mining biological pathways using WikiPathways web services.
title_short	Mining biological pathways using WikiPathways web services.
title_full	Mining biological pathways using WikiPathways web services.
title_fullStr	Mining biological pathways using WikiPathways web services.
title_full_unstemmed	Mining biological pathways using WikiPathways web services.
title_sort	mining biological pathways using wikipathways web services.
publisher	Public Library of Science (PLoS)
publishDate	2009
url	https://doaj.org/article/d26135ccf4444b89931d591aec6ac7a5
work_keys_str_mv	AT thomaskelder miningbiologicalpathwaysusingwikipathwayswebservices AT alexanderrpico miningbiologicalpathwaysusingwikipathwayswebservices AT kristinahanspers miningbiologicalpathwaysusingwikipathwayswebservices AT martijnpvaniersel miningbiologicalpathwaysusingwikipathwayswebservices AT chrisevelo miningbiologicalpathwaysusingwikipathwayswebservices AT brucerconklin miningbiologicalpathwaysusingwikipathwayswebservices
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Mining biological pathways using WikiPathways web services.

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