Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification

Clinical and molecular heterogeneity of ulcerative colitis presents unresolved challenges to identify predictive biomarkers of response to therapies. Here, the authors combine mouse colitis time course with patient biopsy transcriptomes, achieving unsupervised clustering of UC patients correlating w...

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Autores principales: Paulo Czarnewski, Sara M. Parigi, Chiara Sorini, Oscar E. Diaz, Srustidhar Das, Nicola Gagliani, Eduardo J. Villablanca
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2019
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Acceso en línea:https://doaj.org/article/d46d311b84244bbf8766ebda31a8df22
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spelling oai:doaj.org-article:d46d311b84244bbf8766ebda31a8df222021-12-02T16:57:08ZConserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification10.1038/s41467-019-10769-x2041-1723https://doaj.org/article/d46d311b84244bbf8766ebda31a8df222019-06-01T00:00:00Zhttps://doi.org/10.1038/s41467-019-10769-xhttps://doaj.org/toc/2041-1723Clinical and molecular heterogeneity of ulcerative colitis presents unresolved challenges to identify predictive biomarkers of response to therapies. Here, the authors combine mouse colitis time course with patient biopsy transcriptomes, achieving unsupervised clustering of UC patients correlating with therapeutic outcomes in independent data sets.Paulo CzarnewskiSara M. ParigiChiara SoriniOscar E. DiazSrustidhar DasNicola GaglianiEduardo J. VillablancaNature PortfolioarticleScienceQENNature Communications, Vol 10, Iss 1, Pp 1-11 (2019)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Paulo Czarnewski
Sara M. Parigi
Chiara Sorini
Oscar E. Diaz
Srustidhar Das
Nicola Gagliani
Eduardo J. Villablanca
Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
description Clinical and molecular heterogeneity of ulcerative colitis presents unresolved challenges to identify predictive biomarkers of response to therapies. Here, the authors combine mouse colitis time course with patient biopsy transcriptomes, achieving unsupervised clustering of UC patients correlating with therapeutic outcomes in independent data sets.
format article
author Paulo Czarnewski
Sara M. Parigi
Chiara Sorini
Oscar E. Diaz
Srustidhar Das
Nicola Gagliani
Eduardo J. Villablanca
author_facet Paulo Czarnewski
Sara M. Parigi
Chiara Sorini
Oscar E. Diaz
Srustidhar Das
Nicola Gagliani
Eduardo J. Villablanca
author_sort Paulo Czarnewski
title Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
title_short Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
title_full Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
title_fullStr Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
title_full_unstemmed Conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
title_sort conserved transcriptomic profile between mouse and human colitis allows unsupervised patient stratification
publisher Nature Portfolio
publishDate 2019
url https://doaj.org/article/d46d311b84244bbf8766ebda31a8df22
work_keys_str_mv AT pauloczarnewski conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
AT saramparigi conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
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AT oscarediaz conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
AT srustidhardas conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
AT nicolagagliani conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
AT eduardojvillablanca conservedtranscriptomicprofilebetweenmouseandhumancolitisallowsunsupervisedpatientstratification
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