Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study.
<h4>Introduction</h4>TGF-β1 is a multi-functional cytokine that plays an important role in breast carcinogenesis. Critical role of TGF-β1 signaling in breast cancer progression is well documented. Some TGF-β1 polymorphisms influence its expression; however, their impact on breast cancer...
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oai:doaj.org-article:d707e1b1ff1c4e0b81d28e78d36290f62021-11-18T08:50:39ZStrong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study.1932-620310.1371/journal.pone.0075979https://doaj.org/article/d707e1b1ff1c4e0b81d28e78d36290f62013-01-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/24146803/?tool=EBIhttps://doaj.org/toc/1932-6203<h4>Introduction</h4>TGF-β1 is a multi-functional cytokine that plays an important role in breast carcinogenesis. Critical role of TGF-β1 signaling in breast cancer progression is well documented. Some TGF-β1 polymorphisms influence its expression; however, their impact on breast cancer risk is not clear.<h4>Methods</h4>We analyzed 1222 samples in a candidate gene-based genetic association study on two distantly located and ethnically divergent case-control groups of Indian women, followed by a population-based genetic epidemiology study analyzing these polymorphisms in other Indian populations. The c.29C>T (Pro10Leu, rs1982073 or rs1800470) and c.74G>C (Arg25Pro, rs1800471) polymorphisms in the TGF-β1 gene were analyzed using direct DNA sequencing, and peripheral level of TGF-β1 were measured by ELISA.<h4>Results</h4>c.29C>T substitution increased breast cancer risk, irrespective of ethnicity and menopausal status. On the other hand, c.74G>C substitution reduced breast cancer risk significantly in the north Indian group (p = 0.0005) and only in the pre-menopausal women. The protective effect of c.74G>C polymorphism may be ethnicity-specific, as no association was seen in south Indian group. The polymorphic status of c.29C>T was comparable among Indo-Europeans, Dravidians, and Tibeto-Burmans. Interestingly, we found that Tibeto-Burmans lack polymorphism at c.74G>C locus as true for the Chinese populations. However, the Brahmins of Nepal (Indo-Europeans) showed polymorphism in 2.08% of alleles. Mean TGF-β1 was significantly elevated in patients in comparison to controls (p<0.001).<h4>Conclusion</h4>c.29C>T and c.74G>C polymorphisms in the TGF-β1 gene significantly affect breast cancer risk, which correlates with elevated TGF-β1 level in the patients. The c.29C>T locus is polymorphic across ethnically different populations, but c.74G>C locus is monomorphic in Tibeto-Burmans and polymorphic in other Indian populations.Singh PoojaAmirtharaj FrancisSingh RajenderRakesh TamangRaja RajkumarKaran Singh SainiKaling MeguMadhu Mati GoelDaminani SurekhaDigumarthi Raghunatha RaoLakshmi RaoLingadakai RamachandraSandeep KumarSurender KumarSatti VishnupriyaKapaettu SatyamoorthyMahendra Pal Singh NegiKumarasamy ThangarajRituraj KonwarPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 8, Iss 10, p e75979 (2013) |
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Medicine R Science Q |
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Medicine R Science Q Singh Pooja Amirtharaj Francis Singh Rajender Rakesh Tamang Raja Rajkumar Karan Singh Saini Kaling Megu Madhu Mati Goel Daminani Surekha Digumarthi Raghunatha Rao Lakshmi Rao Lingadakai Ramachandra Sandeep Kumar Surender Kumar Satti Vishnupriya Kapaettu Satyamoorthy Mahendra Pal Singh Negi Kumarasamy Thangaraj Rituraj Konwar Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| description |
<h4>Introduction</h4>TGF-β1 is a multi-functional cytokine that plays an important role in breast carcinogenesis. Critical role of TGF-β1 signaling in breast cancer progression is well documented. Some TGF-β1 polymorphisms influence its expression; however, their impact on breast cancer risk is not clear.<h4>Methods</h4>We analyzed 1222 samples in a candidate gene-based genetic association study on two distantly located and ethnically divergent case-control groups of Indian women, followed by a population-based genetic epidemiology study analyzing these polymorphisms in other Indian populations. The c.29C>T (Pro10Leu, rs1982073 or rs1800470) and c.74G>C (Arg25Pro, rs1800471) polymorphisms in the TGF-β1 gene were analyzed using direct DNA sequencing, and peripheral level of TGF-β1 were measured by ELISA.<h4>Results</h4>c.29C>T substitution increased breast cancer risk, irrespective of ethnicity and menopausal status. On the other hand, c.74G>C substitution reduced breast cancer risk significantly in the north Indian group (p = 0.0005) and only in the pre-menopausal women. The protective effect of c.74G>C polymorphism may be ethnicity-specific, as no association was seen in south Indian group. The polymorphic status of c.29C>T was comparable among Indo-Europeans, Dravidians, and Tibeto-Burmans. Interestingly, we found that Tibeto-Burmans lack polymorphism at c.74G>C locus as true for the Chinese populations. However, the Brahmins of Nepal (Indo-Europeans) showed polymorphism in 2.08% of alleles. Mean TGF-β1 was significantly elevated in patients in comparison to controls (p<0.001).<h4>Conclusion</h4>c.29C>T and c.74G>C polymorphisms in the TGF-β1 gene significantly affect breast cancer risk, which correlates with elevated TGF-β1 level in the patients. The c.29C>T locus is polymorphic across ethnically different populations, but c.74G>C locus is monomorphic in Tibeto-Burmans and polymorphic in other Indian populations. |
| format |
article |
| author |
Singh Pooja Amirtharaj Francis Singh Rajender Rakesh Tamang Raja Rajkumar Karan Singh Saini Kaling Megu Madhu Mati Goel Daminani Surekha Digumarthi Raghunatha Rao Lakshmi Rao Lingadakai Ramachandra Sandeep Kumar Surender Kumar Satti Vishnupriya Kapaettu Satyamoorthy Mahendra Pal Singh Negi Kumarasamy Thangaraj Rituraj Konwar |
| author_facet |
Singh Pooja Amirtharaj Francis Singh Rajender Rakesh Tamang Raja Rajkumar Karan Singh Saini Kaling Megu Madhu Mati Goel Daminani Surekha Digumarthi Raghunatha Rao Lakshmi Rao Lingadakai Ramachandra Sandeep Kumar Surender Kumar Satti Vishnupriya Kapaettu Satyamoorthy Mahendra Pal Singh Negi Kumarasamy Thangaraj Rituraj Konwar |
| author_sort |
Singh Pooja |
| title |
Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| title_short |
Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| title_full |
Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| title_fullStr |
Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| title_full_unstemmed |
Strong impact of TGF-β1 gene polymorphisms on breast cancer risk in Indian women: a case-control and population-based study. |
| title_sort |
strong impact of tgf-β1 gene polymorphisms on breast cancer risk in indian women: a case-control and population-based study. |
| publisher |
Public Library of Science (PLoS) |
| publishDate |
2013 |
| url |
https://doaj.org/article/d707e1b1ff1c4e0b81d28e78d36290f6 |
| work_keys_str_mv |
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