A computational framework to study sub-cellular RNA localization

Automated analysis of RNA localisation in smFISH data has been elusive. Here, the authors simulate and use a large dataset of images to design and validate a framework for highly accurate classification of sub-cellular RNA localisation patterns from smFISH experiments.

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Autores principales:	Aubin Samacoits, Racha Chouaib, Adham Safieddine, Abdel-Meneem Traboulsi, Wei Ouyang, Christophe Zimmer, Marion Peter, Edouard Bertrand, Thomas Walter, Florian Mueller
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2018
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/d764029d18694212956189e233896653
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spelling	oai:doaj.org-article:d764029d18694212956189e2338966532021-12-02T14:39:05ZA computational framework to study sub-cellular RNA localization10.1038/s41467-018-06868-w2041-1723https://doaj.org/article/d764029d18694212956189e2338966532018-11-01T00:00:00Zhttps://doi.org/10.1038/s41467-018-06868-whttps://doaj.org/toc/2041-1723Automated analysis of RNA localisation in smFISH data has been elusive. Here, the authors simulate and use a large dataset of images to design and validate a framework for highly accurate classification of sub-cellular RNA localisation patterns from smFISH experiments.Aubin SamacoitsRacha ChouaibAdham SafieddineAbdel-Meneem TraboulsiWei OuyangChristophe ZimmerMarion PeterEdouard BertrandThomas WalterFlorian MuellerNature PortfolioarticleScienceQENNature Communications, Vol 9, Iss 1, Pp 1-10 (2018)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Aubin Samacoits Racha Chouaib Adham Safieddine Abdel-Meneem Traboulsi Wei Ouyang Christophe Zimmer Marion Peter Edouard Bertrand Thomas Walter Florian Mueller A computational framework to study sub-cellular RNA localization
description	Automated analysis of RNA localisation in smFISH data has been elusive. Here, the authors simulate and use a large dataset of images to design and validate a framework for highly accurate classification of sub-cellular RNA localisation patterns from smFISH experiments.
format	article
author	Aubin Samacoits Racha Chouaib Adham Safieddine Abdel-Meneem Traboulsi Wei Ouyang Christophe Zimmer Marion Peter Edouard Bertrand Thomas Walter Florian Mueller
author_facet	Aubin Samacoits Racha Chouaib Adham Safieddine Abdel-Meneem Traboulsi Wei Ouyang Christophe Zimmer Marion Peter Edouard Bertrand Thomas Walter Florian Mueller
author_sort	Aubin Samacoits
title	A computational framework to study sub-cellular RNA localization
title_short	A computational framework to study sub-cellular RNA localization
title_full	A computational framework to study sub-cellular RNA localization
title_fullStr	A computational framework to study sub-cellular RNA localization
title_full_unstemmed	A computational framework to study sub-cellular RNA localization
title_sort	computational framework to study sub-cellular rna localization
publisher	Nature Portfolio
publishDate	2018
url	https://doaj.org/article/d764029d18694212956189e233896653
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A computational framework to study sub-cellular RNA localization

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