Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data

Abstract. Sundari, Nurhasanah, Mas'ud A, Amin M, Arumingtyas EL, Azrianingsih R. 2019. Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data. Biodiversitas 20: 1510-1515. Clove (Syzygium aromaticum L. Merr...

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Autores principales:	SUNDARI SUNDARI, NURHASANAH NURHASANAH, ABDU MAS’UD, MOHAMAD AMIN, ESTRI LARAS ARUMINGTYAS, RODIYATI AZRIANINGSIH
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2019
Materias:	ancestor, native, clove, phylogenetic, its, north maluku Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/d885ab24975043bd979bdec3efca6664
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spelling	oai:doaj.org-article:d885ab24975043bd979bdec3efca66642021-11-21T21:41:27ZShort Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data1412-033X2085-472210.13057/biodiv/d200604https://doaj.org/article/d885ab24975043bd979bdec3efca66642019-05-01T00:00:00Zhttps://smujo.id/biodiv/article/view/3360https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Sundari, Nurhasanah, Mas'ud A, Amin M, Arumingtyas EL, Azrianingsih R. 2019. Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data. Biodiversitas 20: 1510-1515. Clove (Syzygium aromaticum L. Merr & Perry) is a native spice plant species in Indonesia, especially Maluku and North Maluku. The phylogenetic relationship among local varieties of cloves in North Maluku, Indonesia is currently unclear; therefore molecular verification research is required for further conservation and breeding programs. This study aims to identify the taxonomic position and phylogenetic relationship among two valuable local varieties of cloves rom North Maluku, i.e., ’Afo’ and ’Sibela’, based on ITS sequences data. Afo clove is considered as the oldest clove native to Ternate island, and Sibela clove is the oldest clove native to Bacan Island. The phylogenetic analysis using both Maximum Parsimony and Neighbour Joining algorithms confirmed the monophyletic group of cloves (S. aromaticum) and separated to outgroup of Eugenia species. Both phylogenetic trees produced three clades with the same pattern and supported by strong bootstrap values of 99-100%.SUNDARI SUNDARINURHASANAH NURHASANAHABDU MAS’UDMOHAMAD AMINESTRI LARAS ARUMINGTYASRODIYATI AZRIANINGSIHMBI & UNS Soloarticleancestor, native, clove, phylogenetic, its, north malukuBiology (General)QH301-705.5ENBiodiversitas, Vol 20, Iss 6 (2019)
institution	DOAJ
collection	DOAJ
language	EN
topic	ancestor, native, clove, phylogenetic, its, north maluku Biology (General) QH301-705.5
spellingShingle	ancestor, native, clove, phylogenetic, its, north maluku Biology (General) QH301-705.5 SUNDARI SUNDARI NURHASANAH NURHASANAH ABDU MAS’UD MOHAMAD AMIN ESTRI LARAS ARUMINGTYAS RODIYATI AZRIANINGSIH Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
description	Abstract. Sundari, Nurhasanah, Mas'ud A, Amin M, Arumingtyas EL, Azrianingsih R. 2019. Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data. Biodiversitas 20: 1510-1515. Clove (Syzygium aromaticum L. Merr & Perry) is a native spice plant species in Indonesia, especially Maluku and North Maluku. The phylogenetic relationship among local varieties of cloves in North Maluku, Indonesia is currently unclear; therefore molecular verification research is required for further conservation and breeding programs. This study aims to identify the taxonomic position and phylogenetic relationship among two valuable local varieties of cloves rom North Maluku, i.e., ’Afo’ and ’Sibela’, based on ITS sequences data. Afo clove is considered as the oldest clove native to Ternate island, and Sibela clove is the oldest clove native to Bacan Island. The phylogenetic analysis using both Maximum Parsimony and Neighbour Joining algorithms confirmed the monophyletic group of cloves (S. aromaticum) and separated to outgroup of Eugenia species. Both phylogenetic trees produced three clades with the same pattern and supported by strong bootstrap values of 99-100%.
format	article
author	SUNDARI SUNDARI NURHASANAH NURHASANAH ABDU MAS’UD MOHAMAD AMIN ESTRI LARAS ARUMINGTYAS RODIYATI AZRIANINGSIH
author_facet	SUNDARI SUNDARI NURHASANAH NURHASANAH ABDU MAS’UD MOHAMAD AMIN ESTRI LARAS ARUMINGTYAS RODIYATI AZRIANINGSIH
author_sort	SUNDARI SUNDARI
title	Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
title_short	Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
title_full	Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
title_fullStr	Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
title_full_unstemmed	Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data
title_sort	short communication: update phylogenetic information of the local varieties of cloves (syzygium aromaticum) from north maluku, indonesia based on its sequences data
publisher	MBI & UNS Solo
publishDate	2019
url	https://doaj.org/article/d885ab24975043bd979bdec3efca6664
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Short Communication: Update phylogenetic information of the local varieties of cloves (Syzygium aromaticum) from North Maluku, Indonesia based on ITS sequences data

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