Profiling of Bacterial and Fungal Microbial Communities in Cystic Fibrosis Sputum Using RNA

Profiling of Bacterial and Fungal Microbial Communities in Cystic Fibrosis Sputum Using RNA

ABSTRACT Here, we report an approach to detect diverse bacterial and fungal taxa in complex samples by direct analysis of community RNA in one step using NanoString probe sets. We designed rRNA-targeting probe sets to detect 42 bacterial and fungal genera or species common in cystic fibrosis (CF) sp...

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Bibliographic Details
Main Authors: Nora Grahl, Emily L. Dolben, Laura M. Filkins, Alex W. Crocker, Sven D. Willger, Hilary G. Morrison, Mitchell L. Sogin, Alix Ashare, Alex H. Gifford, Nicholas J. Jacobs, Joseph D. Schwartzman, Deborah A. Hogan
Format: article
Language:EN
Published: American Society for Microbiology 2018
Subjects:
NanoString
bacteria
clinical microbiology
cystic fibrosis
fungi
microbial communities
Microbiology
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Online Access:https://doaj.org/article/e00226b7180942a295dba54c63ab9bf1
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https://doaj.org/article/e00226b7180942a295dba54c63ab9bf1

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