Estimating the confidence level of white matter connections obtained with MRI tractography.
<h4>Background</h4>Since the emergence of diffusion tensor imaging, a lot of work has been done to better understand the properties of diffusion MRI tractography. However, the validation of the reconstructed fiber connections remains problematic in many respects. For example, it is diffi...
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2008
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oai:doaj.org-article:e0da5d571386407dac0ba1c2a760f30d2021-11-25T06:18:05ZEstimating the confidence level of white matter connections obtained with MRI tractography.1932-620310.1371/journal.pone.0004006https://doaj.org/article/e0da5d571386407dac0ba1c2a760f30d2008-01-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/19104666/pdf/?tool=EBIhttps://doaj.org/toc/1932-6203<h4>Background</h4>Since the emergence of diffusion tensor imaging, a lot of work has been done to better understand the properties of diffusion MRI tractography. However, the validation of the reconstructed fiber connections remains problematic in many respects. For example, it is difficult to assess whether a connection is the result of the diffusion coherence contrast itself or the simple result of other uncontrolled parameters like for example: noise, brain geometry and algorithmic characteristics.<h4>Methodology/principal findings</h4>In this work, we propose a method to estimate the respective contributions of diffusion coherence versus other effects to a tractography result by comparing data sets with and without diffusion coherence contrast. We use this methodology to assign a confidence level to every gray matter to gray matter connection and add this new information directly in the connectivity matrix.<h4>Conclusions/significance</h4>Our results demonstrate that whereas we can have a strong confidence in mid- and long-range connections obtained by a tractography experiment, it is difficult to distinguish between short connections traced due to diffusion coherence contrast from those produced by chance due to the other uncontrolled factors of the tractography methodology.Xavier GigandetPatric HagmannMaciej KurantLeila CammounReto MeuliJean-Philippe ThiranPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 3, Iss 12, p e4006 (2008) |
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Medicine R Science Q Xavier Gigandet Patric Hagmann Maciej Kurant Leila Cammoun Reto Meuli Jean-Philippe Thiran Estimating the confidence level of white matter connections obtained with MRI tractography. |
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<h4>Background</h4>Since the emergence of diffusion tensor imaging, a lot of work has been done to better understand the properties of diffusion MRI tractography. However, the validation of the reconstructed fiber connections remains problematic in many respects. For example, it is difficult to assess whether a connection is the result of the diffusion coherence contrast itself or the simple result of other uncontrolled parameters like for example: noise, brain geometry and algorithmic characteristics.<h4>Methodology/principal findings</h4>In this work, we propose a method to estimate the respective contributions of diffusion coherence versus other effects to a tractography result by comparing data sets with and without diffusion coherence contrast. We use this methodology to assign a confidence level to every gray matter to gray matter connection and add this new information directly in the connectivity matrix.<h4>Conclusions/significance</h4>Our results demonstrate that whereas we can have a strong confidence in mid- and long-range connections obtained by a tractography experiment, it is difficult to distinguish between short connections traced due to diffusion coherence contrast from those produced by chance due to the other uncontrolled factors of the tractography methodology. |
format |
article |
author |
Xavier Gigandet Patric Hagmann Maciej Kurant Leila Cammoun Reto Meuli Jean-Philippe Thiran |
author_facet |
Xavier Gigandet Patric Hagmann Maciej Kurant Leila Cammoun Reto Meuli Jean-Philippe Thiran |
author_sort |
Xavier Gigandet |
title |
Estimating the confidence level of white matter connections obtained with MRI tractography. |
title_short |
Estimating the confidence level of white matter connections obtained with MRI tractography. |
title_full |
Estimating the confidence level of white matter connections obtained with MRI tractography. |
title_fullStr |
Estimating the confidence level of white matter connections obtained with MRI tractography. |
title_full_unstemmed |
Estimating the confidence level of white matter connections obtained with MRI tractography. |
title_sort |
estimating the confidence level of white matter connections obtained with mri tractography. |
publisher |
Public Library of Science (PLoS) |
publishDate |
2008 |
url |
https://doaj.org/article/e0da5d571386407dac0ba1c2a760f30d |
work_keys_str_mv |
AT xaviergigandet estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography AT patrichagmann estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography AT maciejkurant estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography AT leilacammoun estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography AT retomeuli estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography AT jeanphilippethiran estimatingtheconfidencelevelofwhitematterconnectionsobtainedwithmritractography |
_version_ |
1718413957509677056 |