BEARscc determines robustness of single-cell clusters using simulated technical replicates

Single cell messenger RNAseq allows the study of heterogeneity in tissue samples. Here the authors present BEARscc, a tool that uses RNA spike-in controls to simulate experiment-specific technical replicates to estimate the robustness of computational predictions of subpopulations of cells.

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Detalles Bibliográficos
Autores principales: D. T. Severson, R. P. Owen, M. J. White, X. Lu, B. Schuster-Böckler
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2018
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Acceso en línea:https://doaj.org/article/e2a5876aba4b4caa92376abdac2b5548
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Sumario:Single cell messenger RNAseq allows the study of heterogeneity in tissue samples. Here the authors present BEARscc, a tool that uses RNA spike-in controls to simulate experiment-specific technical replicates to estimate the robustness of computational predictions of subpopulations of cells.