Genome-wide prediction of DNase I hypersensitivity using gene expression

A map of the activities of all genomic regulatory elements across cell types and conditions would be a tremendous resource. The computational method introduced here predicts genome-wide accessible sites from gene expression data and allows the authors to build a database of regulatory element activi...

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Autores principales:	Weiqiang Zhou, Ben Sherwood, Zhicheng Ji, Yingchao Xue, Fang Du, Jiawei Bai, Mingyao Ying, Hongkai Ji
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2017
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/e4f7d3f666b34099a714b5e909d78b44
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spelling	oai:doaj.org-article:e4f7d3f666b34099a714b5e909d78b442021-12-02T15:38:51ZGenome-wide prediction of DNase I hypersensitivity using gene expression10.1038/s41467-017-01188-x2041-1723https://doaj.org/article/e4f7d3f666b34099a714b5e909d78b442017-10-01T00:00:00Zhttps://doi.org/10.1038/s41467-017-01188-xhttps://doaj.org/toc/2041-1723A map of the activities of all genomic regulatory elements across cell types and conditions would be a tremendous resource. The computational method introduced here predicts genome-wide accessible sites from gene expression data and allows the authors to build a database of regulatory element activities using publicly available transcriptome data.Weiqiang ZhouBen SherwoodZhicheng JiYingchao XueFang DuJiawei BaiMingyao YingHongkai JiNature PortfolioarticleScienceQENNature Communications, Vol 8, Iss 1, Pp 1-17 (2017)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Weiqiang Zhou Ben Sherwood Zhicheng Ji Yingchao Xue Fang Du Jiawei Bai Mingyao Ying Hongkai Ji Genome-wide prediction of DNase I hypersensitivity using gene expression
description	A map of the activities of all genomic regulatory elements across cell types and conditions would be a tremendous resource. The computational method introduced here predicts genome-wide accessible sites from gene expression data and allows the authors to build a database of regulatory element activities using publicly available transcriptome data.
format	article
author	Weiqiang Zhou Ben Sherwood Zhicheng Ji Yingchao Xue Fang Du Jiawei Bai Mingyao Ying Hongkai Ji
author_facet	Weiqiang Zhou Ben Sherwood Zhicheng Ji Yingchao Xue Fang Du Jiawei Bai Mingyao Ying Hongkai Ji
author_sort	Weiqiang Zhou
title	Genome-wide prediction of DNase I hypersensitivity using gene expression
title_short	Genome-wide prediction of DNase I hypersensitivity using gene expression
title_full	Genome-wide prediction of DNase I hypersensitivity using gene expression
title_fullStr	Genome-wide prediction of DNase I hypersensitivity using gene expression
title_full_unstemmed	Genome-wide prediction of DNase I hypersensitivity using gene expression
title_sort	genome-wide prediction of dnase i hypersensitivity using gene expression
publisher	Nature Portfolio
publishDate	2017
url	https://doaj.org/article/e4f7d3f666b34099a714b5e909d78b44
work_keys_str_mv	AT weiqiangzhou genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT bensherwood genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT zhichengji genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT yingchaoxue genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT fangdu genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT jiaweibai genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT mingyaoying genomewidepredictionofdnaseihypersensitivityusinggeneexpression AT hongkaiji genomewidepredictionofdnaseihypersensitivityusinggeneexpression
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Genome-wide prediction of DNase I hypersensitivity using gene expression

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