High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage

Bacterial growth rate can change under different environmental conditions and reveals important biological and ecological information. Here, the authors develop GRiD, a bioinformatics tool for high-throughput estimation of growth rate using low coverage metagenomic data.

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Detalles Bibliográficos
Autores principales:	Akintunde Emiola, Julia Oh
Formato:	article
Lenguaje:	EN
Publicado:	Nature Portfolio 2018
Materias:	Science Q
Acceso en línea:	https://doaj.org/article/e68bf62711ff4f438629f3ec7c0b4145
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spelling	oai:doaj.org-article:e68bf62711ff4f438629f3ec7c0b41452021-12-02T14:38:53ZHigh throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage10.1038/s41467-018-07240-82041-1723https://doaj.org/article/e68bf62711ff4f438629f3ec7c0b41452018-11-01T00:00:00Zhttps://doi.org/10.1038/s41467-018-07240-8https://doaj.org/toc/2041-1723Bacterial growth rate can change under different environmental conditions and reveals important biological and ecological information. Here, the authors develop GRiD, a bioinformatics tool for high-throughput estimation of growth rate using low coverage metagenomic data.Akintunde EmiolaJulia OhNature PortfolioarticleScienceQENNature Communications, Vol 9, Iss 1, Pp 1-8 (2018)
institution	DOAJ
collection	DOAJ
language	EN
topic	Science Q
spellingShingle	Science Q Akintunde Emiola Julia Oh High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
description	Bacterial growth rate can change under different environmental conditions and reveals important biological and ecological information. Here, the authors develop GRiD, a bioinformatics tool for high-throughput estimation of growth rate using low coverage metagenomic data.
format	article
author	Akintunde Emiola Julia Oh
author_facet	Akintunde Emiola Julia Oh
author_sort	Akintunde Emiola
title	High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
title_short	High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
title_full	High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
title_fullStr	High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
title_full_unstemmed	High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
title_sort	high throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage
publisher	Nature Portfolio
publishDate	2018
url	https://doaj.org/article/e68bf62711ff4f438629f3ec7c0b4145
work_keys_str_mv	AT akintundeemiola highthroughputinsitumetagenomicmeasurementofbacterialreplicationatultralowsequencingcoverage AT juliaoh highthroughputinsitumetagenomicmeasurementofbacterialreplicationatultralowsequencingcoverage
_version_	1718390866450579456

High throughput in situ metagenomic measurement of bacterial replication at ultra-low sequencing coverage

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