Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits

Abstract. Sadiyah H, Soegianto A, Waluyo B, Ashari S. 2020. Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits. Biodiversitas 21: 759-769. Accurate knowledge of the genetic relationships between di...

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Autores principales:	halimatus sadiyah, Andy Soegianto, Budi Waluyo, Sumeru Ashari
Formato:	article
Lenguaje:	EN
Publicado:	MBI & UNS Solo 2020
Materias:	characterization, genetic distance, groundcherry, physalis angulata Biology (General) QH301-705.5
Acceso en línea:	https://doaj.org/article/ea8ba484114e4147b86b14e123427998
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spelling	oai:doaj.org-article:ea8ba484114e4147b86b14e1234279982021-11-21T22:01:10ZShort Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits1412-033X2085-472210.13057/biodiv/d210244https://doaj.org/article/ea8ba484114e4147b86b14e1234279982020-01-01T00:00:00Zhttps://smujo.id/biodiv/article/view/4688https://doaj.org/toc/1412-033Xhttps://doaj.org/toc/2085-4722Abstract. Sadiyah H, Soegianto A, Waluyo B, Ashari S. 2020. Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits. Biodiversitas 21: 759-769. Accurate knowledge of the genetic relationships between different germplasms is important for successful crop improvement programs through breeding. This work aimed to i) characterize the groundcherry germplasm collected from the field of eastern Java and Madura Island based on their morpho-agronomic performance, ii) investigate the relationships among the different germplasms, and iii) verify whether simultaneous analysis of quantitative-qualitative data (joint analysis) can reveal new clustering patterns. A total of 26 quantitative and 31 qualitative traits were measured and evaluated for 28 accessions. Principal Component Analysis (PCA) was used to select variables that had significant loading, based on a t-test, for inclusion in cluster analysis. The first clustering method was the Unweighted Pair Group Method with Arithmetic Mean (UPGMA), which only involved quantitative variables using the Manhattan distance. This method was followed by a joint analysis using Gower dissimilarity. Nonparametric multivariate analysis of variance test showed that four clusters were the optimum number for both methods, but the clusters for each method had different members. The coefficient of variation ranged from 3.9 (fruit pH) to 45.5 (productivity per plant), indicating that improvement in the productivity in groundcherry was promising. The mean values of the morpho-agronomic traits for accessions from eastern Java and Madura Island were not significantly different, except for fruit firmness and the mean length of two internodes. In general, geographic isolation did not have much influence on the characteristics of an accession, since there were accessions from these two regions that were members of the same group, identified by the clustering analysis.halimatus sadiyahAndy SoegiantoBudi WaluyoSumeru AshariMBI & UNS Soloarticlecharacterization, genetic distance, groundcherry, physalis angulataBiology (General)QH301-705.5ENBiodiversitas, Vol 21, Iss 2 (2020)
institution	DOAJ
collection	DOAJ
language	EN
topic	characterization, genetic distance, groundcherry, physalis angulata Biology (General) QH301-705.5
spellingShingle	characterization, genetic distance, groundcherry, physalis angulata Biology (General) QH301-705.5 halimatus sadiyah Andy Soegianto Budi Waluyo Sumeru Ashari Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
description	Abstract. Sadiyah H, Soegianto A, Waluyo B, Ashari S. 2020. Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits. Biodiversitas 21: 759-769. Accurate knowledge of the genetic relationships between different germplasms is important for successful crop improvement programs through breeding. This work aimed to i) characterize the groundcherry germplasm collected from the field of eastern Java and Madura Island based on their morpho-agronomic performance, ii) investigate the relationships among the different germplasms, and iii) verify whether simultaneous analysis of quantitative-qualitative data (joint analysis) can reveal new clustering patterns. A total of 26 quantitative and 31 qualitative traits were measured and evaluated for 28 accessions. Principal Component Analysis (PCA) was used to select variables that had significant loading, based on a t-test, for inclusion in cluster analysis. The first clustering method was the Unweighted Pair Group Method with Arithmetic Mean (UPGMA), which only involved quantitative variables using the Manhattan distance. This method was followed by a joint analysis using Gower dissimilarity. Nonparametric multivariate analysis of variance test showed that four clusters were the optimum number for both methods, but the clusters for each method had different members. The coefficient of variation ranged from 3.9 (fruit pH) to 45.5 (productivity per plant), indicating that improvement in the productivity in groundcherry was promising. The mean values of the morpho-agronomic traits for accessions from eastern Java and Madura Island were not significantly different, except for fruit firmness and the mean length of two internodes. In general, geographic isolation did not have much influence on the characteristics of an accession, since there were accessions from these two regions that were members of the same group, identified by the clustering analysis.
format	article
author	halimatus sadiyah Andy Soegianto Budi Waluyo Sumeru Ashari
author_facet	halimatus sadiyah Andy Soegianto Budi Waluyo Sumeru Ashari
author_sort	halimatus sadiyah
title	Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
title_short	Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
title_full	Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
title_fullStr	Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
title_full_unstemmed	Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits
title_sort	short communication: preliminary characterization of groundcherry (physalis angulata) from east java province, indonesia based on morpho-agronomic traits
publisher	MBI & UNS Solo
publishDate	2020
url	https://doaj.org/article/ea8ba484114e4147b86b14e123427998
work_keys_str_mv	AT halimatussadiyah shortcommunicationpreliminarycharacterizationofgroundcherryphysalisangulatafromeastjavaprovinceindonesiabasedonmorphoagronomictraits AT andysoegianto shortcommunicationpreliminarycharacterizationofgroundcherryphysalisangulatafromeastjavaprovinceindonesiabasedonmorphoagronomictraits AT budiwaluyo shortcommunicationpreliminarycharacterizationofgroundcherryphysalisangulatafromeastjavaprovinceindonesiabasedonmorphoagronomictraits AT sumeruashari shortcommunicationpreliminarycharacterizationofgroundcherryphysalisangulatafromeastjavaprovinceindonesiabasedonmorphoagronomictraits
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Short Communication: Preliminary characterization of groundcherry (Physalis angulata) from East Java Province, Indonesia based on morpho-agronomic traits

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