Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis

Bacterial adaptation through frame-shifting insertions and deletions (indels) could be reversed by secondary introduction of a frame-restoring indel. Here, the authors develop ScarTrek, a program that scans genomic data for different indels, and analyze 5977 clinical M. tuberculosis isolates for ind...

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Autores principales: Aditi Gupta, David Alland
Formato: article
Lenguaje:EN
Publicado: Nature Portfolio 2021
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Acceso en línea:https://doaj.org/article/eaeb2ef159784c36a26c5cb80484bdc6
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spelling oai:doaj.org-article:eaeb2ef159784c36a26c5cb80484bdc62021-12-02T14:53:36ZReversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis10.1038/s41467-021-25055-y2041-1723https://doaj.org/article/eaeb2ef159784c36a26c5cb80484bdc62021-08-01T00:00:00Zhttps://doi.org/10.1038/s41467-021-25055-yhttps://doaj.org/toc/2041-1723Bacterial adaptation through frame-shifting insertions and deletions (indels) could be reversed by secondary introduction of a frame-restoring indel. Here, the authors develop ScarTrek, a program that scans genomic data for different indels, and analyze 5977 clinical M. tuberculosis isolates for indel frequency.Aditi GuptaDavid AllandNature PortfolioarticleScienceQENNature Communications, Vol 12, Iss 1, Pp 1-11 (2021)
institution DOAJ
collection DOAJ
language EN
topic Science
Q
spellingShingle Science
Q
Aditi Gupta
David Alland
Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
description Bacterial adaptation through frame-shifting insertions and deletions (indels) could be reversed by secondary introduction of a frame-restoring indel. Here, the authors develop ScarTrek, a program that scans genomic data for different indels, and analyze 5977 clinical M. tuberculosis isolates for indel frequency.
format article
author Aditi Gupta
David Alland
author_facet Aditi Gupta
David Alland
author_sort Aditi Gupta
title Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
title_short Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
title_full Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
title_fullStr Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
title_full_unstemmed Reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for Mycobacterium tuberculosis
title_sort reversible gene silencing through frameshift indels and frameshift scars provide adaptive plasticity for mycobacterium tuberculosis
publisher Nature Portfolio
publishDate 2021
url https://doaj.org/article/eaeb2ef159784c36a26c5cb80484bdc6
work_keys_str_mv AT aditigupta reversiblegenesilencingthroughframeshiftindelsandframeshiftscarsprovideadaptiveplasticityformycobacteriumtuberculosis
AT davidalland reversiblegenesilencingthroughframeshiftindelsandframeshiftscarsprovideadaptiveplasticityformycobacteriumtuberculosis
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