Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.

Chagas' disease is caused by Trypanosoma cruzi, a protozoan transmitted to humans by blood-feeding insects, blood transfusion or congenitally. Previous research led us to discover a parasite proline racemase (TcPRAC) and to establish its validity as a target for the design of new chemotherapies...

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Autores principales: Armand Berneman, Lory Montout, Sophie Goyard, Nathalie Chamond, Alain Cosson, Simon d'Archivio, Nicolas Gouault, Philippe Uriac, Arnaud Blondel, Paola Minoprio
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Publicado: Public Library of Science (PLoS) 2013
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spelling oai:doaj.org-article:f1a53129aa5947b39770b326a747a4932021-11-18T07:49:23ZCombined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.1932-620310.1371/journal.pone.0060955https://doaj.org/article/f1a53129aa5947b39770b326a747a4932013-01-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/23613764/pdf/?tool=EBIhttps://doaj.org/toc/1932-6203Chagas' disease is caused by Trypanosoma cruzi, a protozoan transmitted to humans by blood-feeding insects, blood transfusion or congenitally. Previous research led us to discover a parasite proline racemase (TcPRAC) and to establish its validity as a target for the design of new chemotherapies against the disease, including its chronic form. A known inhibitor of proline racemases, 2-pyrrolecarboxylic acid (PYC), is water-insoluble. We synthesized soluble pyrazole derivatives, but they proved weak or inactive TcPRAC inhibitors. TcPRAC catalytic site is too small and constrained when bound to PYC to allow efficient search for new inhibitors by virtual screening. Forty-nine intermediate conformations between the opened enzyme structure and the closed liganded one were built by calculating a transition path with a method we developed. A wider range of chemical compounds could dock in the partially opened intermediate active site models in silico. Four models were selected for known substrates and weak inhibitors could dock in them and were used to screen chemical libraries. Two identified soluble compounds, (E)-4-oxopent-2-enoic acid (OxoPA) and its derivative (E)-5-bromo-4-oxopent-2-enoic acid (Br-OxoPA), are irreversible competitive inhibitors that presented stronger activity than PYC on TcPRAC. We show here that increasing doses of OxoPA and Br-OxoPA hamper T. cruzi intracellular differentiation and fate in mammalian host cells. Our data confirm that through to their binding mode, these molecules are interesting and promising as lead compounds for the development of chemotherapies against diseases where active proline racemases play essential roles.Armand BernemanLory MontoutSophie GoyardNathalie ChamondAlain CossonSimon d'ArchivioNicolas GouaultPhilippe UriacArnaud BlondelPaola MinoprioPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 8, Iss 4, p e60955 (2013)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Armand Berneman
Lory Montout
Sophie Goyard
Nathalie Chamond
Alain Cosson
Simon d'Archivio
Nicolas Gouault
Philippe Uriac
Arnaud Blondel
Paola Minoprio
Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
description Chagas' disease is caused by Trypanosoma cruzi, a protozoan transmitted to humans by blood-feeding insects, blood transfusion or congenitally. Previous research led us to discover a parasite proline racemase (TcPRAC) and to establish its validity as a target for the design of new chemotherapies against the disease, including its chronic form. A known inhibitor of proline racemases, 2-pyrrolecarboxylic acid (PYC), is water-insoluble. We synthesized soluble pyrazole derivatives, but they proved weak or inactive TcPRAC inhibitors. TcPRAC catalytic site is too small and constrained when bound to PYC to allow efficient search for new inhibitors by virtual screening. Forty-nine intermediate conformations between the opened enzyme structure and the closed liganded one were built by calculating a transition path with a method we developed. A wider range of chemical compounds could dock in the partially opened intermediate active site models in silico. Four models were selected for known substrates and weak inhibitors could dock in them and were used to screen chemical libraries. Two identified soluble compounds, (E)-4-oxopent-2-enoic acid (OxoPA) and its derivative (E)-5-bromo-4-oxopent-2-enoic acid (Br-OxoPA), are irreversible competitive inhibitors that presented stronger activity than PYC on TcPRAC. We show here that increasing doses of OxoPA and Br-OxoPA hamper T. cruzi intracellular differentiation and fate in mammalian host cells. Our data confirm that through to their binding mode, these molecules are interesting and promising as lead compounds for the development of chemotherapies against diseases where active proline racemases play essential roles.
format article
author Armand Berneman
Lory Montout
Sophie Goyard
Nathalie Chamond
Alain Cosson
Simon d'Archivio
Nicolas Gouault
Philippe Uriac
Arnaud Blondel
Paola Minoprio
author_facet Armand Berneman
Lory Montout
Sophie Goyard
Nathalie Chamond
Alain Cosson
Simon d'Archivio
Nicolas Gouault
Philippe Uriac
Arnaud Blondel
Paola Minoprio
author_sort Armand Berneman
title Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
title_short Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
title_full Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
title_fullStr Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
title_full_unstemmed Combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight Chagas' disease.
title_sort combined approaches for drug design points the way to novel proline racemase inhibitor candidates to fight chagas' disease.
publisher Public Library of Science (PLoS)
publishDate 2013
url https://doaj.org/article/f1a53129aa5947b39770b326a747a493
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