PairMotif: A new pattern-driven algorithm for planted (l, d) DNA motif search.

Motif search is a fundamental problem in bioinformatics with an important application in locating transcription factor binding sites (TFBSs) in DNA sequences. The exact algorithms can report all (l, d) motifs and find the best one under a specific objective function. However, it is still a challengi...

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Auteurs principaux: Qiang Yu, Hongwei Huo, Yipu Zhang, Hongzhi Guo
Format: article
Langue:EN
Publié: Public Library of Science (PLoS) 2012
Sujets:
R
Q
Accès en ligne:https://doaj.org/article/f23df5d3df90474c820280cc1b2055be
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