Inferring spatial and signaling relationships between cells from single cell transcriptomic data
Dissociation of tissues allows high-throughput expression profiling of single cells, but spatial information is lost. Here the authors apply an unbalanced and structured optimal transport method to infer spatial and signalling relationships between cells from scRNA-seq data by integrating it with sp...
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| Autores principales: | , |
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| Formato: | article |
| Lenguaje: | EN |
| Publicado: |
Nature Portfolio
2020
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| Materias: | |
| Acceso en línea: | https://doaj.org/article/f4a6e22defa144b7ba4de8cfceb89169 |
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| Sumario: | Dissociation of tissues allows high-throughput expression profiling of single cells, but spatial information is lost. Here the authors apply an unbalanced and structured optimal transport method to infer spatial and signalling relationships between cells from scRNA-seq data by integrating it with spatial imaging data. |
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