The effect of genetic variation on promoter usage and enhancer activity
Expression quantitative trait loci (eQTL) are widely studied, yet the mechanisms by which they exert their effects are largely unknown. Here, performing CAGE-seq on 154 lymphoblastoid cell lines, the authors map regulatory variants associated with promoter usage (puQTLs) and enhancer activity (eaQTL...
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Nature Portfolio
2017
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oai:doaj.org-article:f898d3fe6d3f4ed39e819f0b0e5b759b2021-12-02T14:42:39ZThe effect of genetic variation on promoter usage and enhancer activity10.1038/s41467-017-01467-72041-1723https://doaj.org/article/f898d3fe6d3f4ed39e819f0b0e5b759b2017-11-01T00:00:00Zhttps://doi.org/10.1038/s41467-017-01467-7https://doaj.org/toc/2041-1723Expression quantitative trait loci (eQTL) are widely studied, yet the mechanisms by which they exert their effects are largely unknown. Here, performing CAGE-seq on 154 lymphoblastoid cell lines, the authors map regulatory variants associated with promoter usage (puQTLs) and enhancer activity (eaQTLs).Marco GarieriOlivier DelaneauFederico SantoniRichard J. FishDavid MullPiero CarninciEmmanouil T. DermitzakisStylianos E. AntonarakisAlexandre FortNature PortfolioarticleScienceQENNature Communications, Vol 8, Iss 1, Pp 1-9 (2017) |
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Science Q Marco Garieri Olivier Delaneau Federico Santoni Richard J. Fish David Mull Piero Carninci Emmanouil T. Dermitzakis Stylianos E. Antonarakis Alexandre Fort The effect of genetic variation on promoter usage and enhancer activity |
description |
Expression quantitative trait loci (eQTL) are widely studied, yet the mechanisms by which they exert their effects are largely unknown. Here, performing CAGE-seq on 154 lymphoblastoid cell lines, the authors map regulatory variants associated with promoter usage (puQTLs) and enhancer activity (eaQTLs). |
format |
article |
author |
Marco Garieri Olivier Delaneau Federico Santoni Richard J. Fish David Mull Piero Carninci Emmanouil T. Dermitzakis Stylianos E. Antonarakis Alexandre Fort |
author_facet |
Marco Garieri Olivier Delaneau Federico Santoni Richard J. Fish David Mull Piero Carninci Emmanouil T. Dermitzakis Stylianos E. Antonarakis Alexandre Fort |
author_sort |
Marco Garieri |
title |
The effect of genetic variation on promoter usage and enhancer activity |
title_short |
The effect of genetic variation on promoter usage and enhancer activity |
title_full |
The effect of genetic variation on promoter usage and enhancer activity |
title_fullStr |
The effect of genetic variation on promoter usage and enhancer activity |
title_full_unstemmed |
The effect of genetic variation on promoter usage and enhancer activity |
title_sort |
effect of genetic variation on promoter usage and enhancer activity |
publisher |
Nature Portfolio |
publishDate |
2017 |
url |
https://doaj.org/article/f898d3fe6d3f4ed39e819f0b0e5b759b |
work_keys_str_mv |
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