Reviewing the history of HIV-1: spread of subtype B in the Americas.

The dispersal of HIV-1 subtype B (HIV-1B) is a reflection of the movement of human populations in response to social, political, and geographical issues. The initial dissemination of HIV-1B outside Africa seems to have included the passive involvement of human populations from the Caribbean in sprea...

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Autores principales: Dennis Maletich Junqueira, Rúbia Marília de Medeiros, Maria Cristina Cotta Matte, Leonardo Augusto Luvison Araújo, Jose Artur Bogo Chies, Patricia Ashton-Prolla, Sabrina Esteves de Matos Almeida
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Publicado: Public Library of Science (PLoS) 2011
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spelling oai:doaj.org-article:f992c058579b4094acabb75952b481e42021-11-18T07:33:40ZReviewing the history of HIV-1: spread of subtype B in the Americas.1932-620310.1371/journal.pone.0027489https://doaj.org/article/f992c058579b4094acabb75952b481e42011-01-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/22132104/?tool=EBIhttps://doaj.org/toc/1932-6203The dispersal of HIV-1 subtype B (HIV-1B) is a reflection of the movement of human populations in response to social, political, and geographical issues. The initial dissemination of HIV-1B outside Africa seems to have included the passive involvement of human populations from the Caribbean in spreading the virus to the United States. However, the exact pathways taken during the establishment of the pandemic in the Americas remain unclear. Here, we propose a geographical scenario for the dissemination of HIV-1B in the Americas, based on phylogenetic and genetic statistical analyses of 313 available sequences of the pol gene from 27 countries. Maximum likelihood and bayesian inference methods were used to explore the phylogenetic relationships between HIV-1B sequences, and molecular variance estimates were analyzed to infer the genetic structure of the viral population. We found that the initial dissemination and subsequent spread of subtype B in the Americas occurred via a single introduction event in the Caribbean around 1964 (1950-1967). Phylogenetic trees present evidence of several primary outbreaks in countries in South America, directly seeded by the Caribbean epidemic. Cuba is an exception insofar as its epidemic seems to have been introduced from South America. One clade comprising isolates from different countries emerged in the most-derived branches, reflecting the intense circulation of the virus throughout the American continents. Statistical analysis supports the genetic compartmentalization of the virus among the Americas, with a close relationship between the South American and Caribbean epidemics. These findings reflect the complex establishment of the HIV-1B pandemic and contribute to our understanding between the migration process of human populations and virus diffusion.Dennis Maletich JunqueiraRúbia Marília de MedeirosMaria Cristina Cotta MatteLeonardo Augusto Luvison AraújoJose Artur Bogo ChiesPatricia Ashton-ProllaSabrina Esteves de Matos AlmeidaPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 6, Iss 11, p e27489 (2011)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
Dennis Maletich Junqueira
Rúbia Marília de Medeiros
Maria Cristina Cotta Matte
Leonardo Augusto Luvison Araújo
Jose Artur Bogo Chies
Patricia Ashton-Prolla
Sabrina Esteves de Matos Almeida
Reviewing the history of HIV-1: spread of subtype B in the Americas.
description The dispersal of HIV-1 subtype B (HIV-1B) is a reflection of the movement of human populations in response to social, political, and geographical issues. The initial dissemination of HIV-1B outside Africa seems to have included the passive involvement of human populations from the Caribbean in spreading the virus to the United States. However, the exact pathways taken during the establishment of the pandemic in the Americas remain unclear. Here, we propose a geographical scenario for the dissemination of HIV-1B in the Americas, based on phylogenetic and genetic statistical analyses of 313 available sequences of the pol gene from 27 countries. Maximum likelihood and bayesian inference methods were used to explore the phylogenetic relationships between HIV-1B sequences, and molecular variance estimates were analyzed to infer the genetic structure of the viral population. We found that the initial dissemination and subsequent spread of subtype B in the Americas occurred via a single introduction event in the Caribbean around 1964 (1950-1967). Phylogenetic trees present evidence of several primary outbreaks in countries in South America, directly seeded by the Caribbean epidemic. Cuba is an exception insofar as its epidemic seems to have been introduced from South America. One clade comprising isolates from different countries emerged in the most-derived branches, reflecting the intense circulation of the virus throughout the American continents. Statistical analysis supports the genetic compartmentalization of the virus among the Americas, with a close relationship between the South American and Caribbean epidemics. These findings reflect the complex establishment of the HIV-1B pandemic and contribute to our understanding between the migration process of human populations and virus diffusion.
format article
author Dennis Maletich Junqueira
Rúbia Marília de Medeiros
Maria Cristina Cotta Matte
Leonardo Augusto Luvison Araújo
Jose Artur Bogo Chies
Patricia Ashton-Prolla
Sabrina Esteves de Matos Almeida
author_facet Dennis Maletich Junqueira
Rúbia Marília de Medeiros
Maria Cristina Cotta Matte
Leonardo Augusto Luvison Araújo
Jose Artur Bogo Chies
Patricia Ashton-Prolla
Sabrina Esteves de Matos Almeida
author_sort Dennis Maletich Junqueira
title Reviewing the history of HIV-1: spread of subtype B in the Americas.
title_short Reviewing the history of HIV-1: spread of subtype B in the Americas.
title_full Reviewing the history of HIV-1: spread of subtype B in the Americas.
title_fullStr Reviewing the history of HIV-1: spread of subtype B in the Americas.
title_full_unstemmed Reviewing the history of HIV-1: spread of subtype B in the Americas.
title_sort reviewing the history of hiv-1: spread of subtype b in the americas.
publisher Public Library of Science (PLoS)
publishDate 2011
url https://doaj.org/article/f992c058579b4094acabb75952b481e4
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