Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020

The peste des petits ruminants virus (PPRV) mainly infects goats and sheep and causes a highly contagious disease, PPR. Recently, a PPRV strain named ChinaSX2020 was isolated and confirmed following an indirect immunofluorescence assay and PCR using PPRV-specific antibody and primers, respectively....

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Autores principales:	Lingxia Li, Jinyan Wu, Xiaoan Cao, Jijun He, Xiangtao Liu, Youjun Shang
Formato:	article
Lenguaje:	EN
Publicado:	MDPI AG 2021
Materias:	PPRV genome ChinaSX2020 sequence alignment Veterinary medicine SF600-1100
Acceso en línea:	https://doaj.org/article/face4b78854d42079f5e79e5a8edf857
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id	oai:doaj.org-article:face4b78854d42079f5e79e5a8edf857
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spelling	oai:doaj.org-article:face4b78854d42079f5e79e5a8edf8572021-11-25T19:12:11ZAnalysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX202010.3390/vetsci81102852306-7381https://doaj.org/article/face4b78854d42079f5e79e5a8edf8572021-11-01T00:00:00Zhttps://www.mdpi.com/2306-7381/8/11/285https://doaj.org/toc/2306-7381The peste des petits ruminants virus (PPRV) mainly infects goats and sheep and causes a highly contagious disease, PPR. Recently, a PPRV strain named ChinaSX2020 was isolated and confirmed following an indirect immunofluorescence assay and PCR using PPRV-specific antibody and primers, respectively. A sequencing of the ChinaSX2020 strain showed a genome length of 15,954 nucleotides. A phylogenetic tree analysis showed that the ChinaSX2020 genome was classified into lineage IV of the PRRV genotypes. The genome of the ChinaSX2020 strain was found to be closely related to PPRVs isolated in China between 2013 and 2014. These findings revealed that not a variety of PRRVs but similar PPRVs were continuously spreading and causing sporadic outbreaks in China.Lingxia LiJinyan WuXiaoan CaoJijun HeXiangtao LiuYoujun ShangMDPI AGarticlePPRVgenomeChinaSX2020sequence alignmentVeterinary medicineSF600-1100ENVeterinary Sciences, Vol 8, Iss 285, p 285 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	PPRV genome ChinaSX2020 sequence alignment Veterinary medicine SF600-1100
spellingShingle	PPRV genome ChinaSX2020 sequence alignment Veterinary medicine SF600-1100 Lingxia Li Jinyan Wu Xiaoan Cao Jijun He Xiangtao Liu Youjun Shang Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
description	The peste des petits ruminants virus (PPRV) mainly infects goats and sheep and causes a highly contagious disease, PPR. Recently, a PPRV strain named ChinaSX2020 was isolated and confirmed following an indirect immunofluorescence assay and PCR using PPRV-specific antibody and primers, respectively. A sequencing of the ChinaSX2020 strain showed a genome length of 15,954 nucleotides. A phylogenetic tree analysis showed that the ChinaSX2020 genome was classified into lineage IV of the PRRV genotypes. The genome of the ChinaSX2020 strain was found to be closely related to PPRVs isolated in China between 2013 and 2014. These findings revealed that not a variety of PRRVs but similar PPRVs were continuously spreading and causing sporadic outbreaks in China.
format	article
author	Lingxia Li Jinyan Wu Xiaoan Cao Jijun He Xiangtao Liu Youjun Shang
author_facet	Lingxia Li Jinyan Wu Xiaoan Cao Jijun He Xiangtao Liu Youjun Shang
author_sort	Lingxia Li
title	Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
title_short	Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
title_full	Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
title_fullStr	Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
title_full_unstemmed	Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020
title_sort	analysis and sequence alignment of peste des petits ruminants virus chinasx2020
publisher	MDPI AG
publishDate	2021
url	https://doaj.org/article/face4b78854d42079f5e79e5a8edf857
work_keys_str_mv	AT lingxiali analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020 AT jinyanwu analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020 AT xiaoancao analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020 AT jijunhe analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020 AT xiangtaoliu analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020 AT youjunshang analysisandsequencealignmentofpestedespetitsruminantsviruschinasx2020
_version_	1718410193200480256

Analysis and Sequence Alignment of Peste des Petits Ruminants Virus ChinaSX2020

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