Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.

Current models of schizophrenia and bipolar disorder implicate multiple genes, however their biological relationships remain elusive. To test the genetic role of glutamate receptors and their interacting scaffold proteins, the exons of ten glutamatergic 'hub' genes in 1304 individuals were...

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Autores principales: René A W Frank, Allan F McRae, Andrew J Pocklington, Louie N van de Lagemaat, Pau Navarro, Mike D R Croning, Noboru H Komiyama, Sophie J Bradley, R A John Challiss, J Douglas Armstrong, Robert D Finn, Mary P Malloy, Alan W MacLean, Sarah E Harris, John M Starr, Sanjeev S Bhaskar, Eleanor K Howard, Sarah E Hunt, Alison J Coffey, Venkatesh Ranganath, Panos Deloukas, Jane Rogers, Walter J Muir, Ian J Deary, Douglas H Blackwood, Peter M Visscher, Seth G N Grant
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Publicado: Public Library of Science (PLoS) 2011
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spelling oai:doaj.org-article:fc8f88c9f5314babada323faa5b3d3512021-11-18T06:54:39ZClustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.1932-620310.1371/journal.pone.0019011https://doaj.org/article/fc8f88c9f5314babada323faa5b3d3512011-04-01T00:00:00Zhttps://www.ncbi.nlm.nih.gov/pmc/articles/pmid/21559497/?tool=EBIhttps://doaj.org/toc/1932-6203Current models of schizophrenia and bipolar disorder implicate multiple genes, however their biological relationships remain elusive. To test the genetic role of glutamate receptors and their interacting scaffold proteins, the exons of ten glutamatergic 'hub' genes in 1304 individuals were re-sequenced in case and control samples. No significant difference in the overall number of non-synonymous single nucleotide polymorphisms (nsSNPs) was observed between cases and controls. However, cluster analysis of nsSNPs identified two exons encoding the cysteine-rich domain and first transmembrane helix of GRM1 as a risk locus with five mutations highly enriched within these domains. A new splice variant lacking the transmembrane GPCR domain of GRM1 was discovered in the human brain and the GRM1 mutation cluster could perturb the regulation of this variant. The predicted effect on individuals harbouring multiple mutations distributed in their ten hub genes was also examined. Diseased individuals possessed an increased load of deleteriousness from multiple concurrent rare and common coding variants. Together, these data suggest a disease model in which the interplay of compound genetic coding variants, distributed among glutamate receptors and their interacting proteins, contribute to the pathogenesis of schizophrenia and bipolar disorders.René A W FrankAllan F McRaeAndrew J PocklingtonLouie N van de LagemaatPau NavarroMike D R CroningNoboru H KomiyamaSophie J BradleyR A John ChallissJ Douglas ArmstrongRobert D FinnMary P MalloyAlan W MacLeanSarah E HarrisJohn M StarrSanjeev S BhaskarEleanor K HowardSarah E HuntAlison J CoffeyVenkatesh RanganathPanos DeloukasJane RogersWalter J MuirIan J DearyDouglas H BlackwoodPeter M VisscherSeth G N GrantPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 6, Iss 4, p e19011 (2011)
institution DOAJ
collection DOAJ
language EN
topic Medicine
R
Science
Q
spellingShingle Medicine
R
Science
Q
René A W Frank
Allan F McRae
Andrew J Pocklington
Louie N van de Lagemaat
Pau Navarro
Mike D R Croning
Noboru H Komiyama
Sophie J Bradley
R A John Challiss
J Douglas Armstrong
Robert D Finn
Mary P Malloy
Alan W MacLean
Sarah E Harris
John M Starr
Sanjeev S Bhaskar
Eleanor K Howard
Sarah E Hunt
Alison J Coffey
Venkatesh Ranganath
Panos Deloukas
Jane Rogers
Walter J Muir
Ian J Deary
Douglas H Blackwood
Peter M Visscher
Seth G N Grant
Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
description Current models of schizophrenia and bipolar disorder implicate multiple genes, however their biological relationships remain elusive. To test the genetic role of glutamate receptors and their interacting scaffold proteins, the exons of ten glutamatergic 'hub' genes in 1304 individuals were re-sequenced in case and control samples. No significant difference in the overall number of non-synonymous single nucleotide polymorphisms (nsSNPs) was observed between cases and controls. However, cluster analysis of nsSNPs identified two exons encoding the cysteine-rich domain and first transmembrane helix of GRM1 as a risk locus with five mutations highly enriched within these domains. A new splice variant lacking the transmembrane GPCR domain of GRM1 was discovered in the human brain and the GRM1 mutation cluster could perturb the regulation of this variant. The predicted effect on individuals harbouring multiple mutations distributed in their ten hub genes was also examined. Diseased individuals possessed an increased load of deleteriousness from multiple concurrent rare and common coding variants. Together, these data suggest a disease model in which the interplay of compound genetic coding variants, distributed among glutamate receptors and their interacting proteins, contribute to the pathogenesis of schizophrenia and bipolar disorders.
format article
author René A W Frank
Allan F McRae
Andrew J Pocklington
Louie N van de Lagemaat
Pau Navarro
Mike D R Croning
Noboru H Komiyama
Sophie J Bradley
R A John Challiss
J Douglas Armstrong
Robert D Finn
Mary P Malloy
Alan W MacLean
Sarah E Harris
John M Starr
Sanjeev S Bhaskar
Eleanor K Howard
Sarah E Hunt
Alison J Coffey
Venkatesh Ranganath
Panos Deloukas
Jane Rogers
Walter J Muir
Ian J Deary
Douglas H Blackwood
Peter M Visscher
Seth G N Grant
author_facet René A W Frank
Allan F McRae
Andrew J Pocklington
Louie N van de Lagemaat
Pau Navarro
Mike D R Croning
Noboru H Komiyama
Sophie J Bradley
R A John Challiss
J Douglas Armstrong
Robert D Finn
Mary P Malloy
Alan W MacLean
Sarah E Harris
John M Starr
Sanjeev S Bhaskar
Eleanor K Howard
Sarah E Hunt
Alison J Coffey
Venkatesh Ranganath
Panos Deloukas
Jane Rogers
Walter J Muir
Ian J Deary
Douglas H Blackwood
Peter M Visscher
Seth G N Grant
author_sort René A W Frank
title Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
title_short Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
title_full Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
title_fullStr Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
title_full_unstemmed Clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
title_sort clustered coding variants in the glutamate receptor complexes of individuals with schizophrenia and bipolar disorder.
publisher Public Library of Science (PLoS)
publishDate 2011
url https://doaj.org/article/fc8f88c9f5314babada323faa5b3d351
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