Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.

Vascular plant one-zinc-finger (VOZ) transcription factors regulate plant growth and development under drought conditions. Six VOZ transcription factors encoding genes exist in soybean genome (both in Glycine max and Glycine soja). Herein, GmVOZs and GsVOZs were identified through in silico analysis...

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Autores principales:	Shoaib Ur Rehman, Ghulam Qanmber, Muhammad Hammad Nadeem Tahir, Ahsan Irshad, Sajid Fiaz, Furqan Ahmad, Zulfiqar Ali, Muhammad Sajjad, Muhammad Shees, Muhammad Usman, Zhide Geng
Formato:	article
Lenguaje:	EN
Publicado:	Public Library of Science (PLoS) 2021
Materias:	Medicine R Science Q
Acceso en línea:	https://doaj.org/article/fd90fd00d051418ea4e24860b50a1156
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spelling	oai:doaj.org-article:fd90fd00d051418ea4e24860b50a11562021-12-02T20:15:38ZCharacterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.1932-620310.1371/journal.pone.0253836https://doaj.org/article/fd90fd00d051418ea4e24860b50a11562021-01-01T00:00:00Zhttps://doi.org/10.1371/journal.pone.0253836https://doaj.org/toc/1932-6203Vascular plant one-zinc-finger (VOZ) transcription factors regulate plant growth and development under drought conditions. Six VOZ transcription factors encoding genes exist in soybean genome (both in Glycine max and Glycine soja). Herein, GmVOZs and GsVOZs were identified through in silico analysis and characterized with different bioinformatics tools and expression analysis. Phylogenetic analysis classified VOZ genes in four groups. Sequence logos analysis among G. max and G. soja amino acid residues revealed higher conservation. Presence of stress related cis-elements in the upstream regions of GmVOZs and GsVOZs highlights their role in tolerance against abiotic stresses. The collinearity analysis identified 14 paralogous/orthologous gene pairs within and between G. max and G. soja. The Ka/Ks values showed that soybean VOZ genes underwent selection pressure with limited functional deviation arising from whole genome and segmental duplication. The GmVOZs and GsVOZs were found to express in roots and leaves at seedling stage. The qRT-PCR revealed that GmVOZs and GsVOZs transcripts can be regulated by abiotic stresses such as polyethylene glycol (PEG). The findings of this study will provide a reference to decipher physiological and molecular functions of VOZ genes in soybean.Shoaib Ur RehmanGhulam QanmberMuhammad Hammad Nadeem TahirAhsan IrshadSajid FiazFurqan AhmadZulfiqar AliMuhammad SajjadMuhammad SheesMuhammad UsmanZhide GengPublic Library of Science (PLoS)articleMedicineRScienceQENPLoS ONE, Vol 16, Iss 7, p e0253836 (2021)
institution	DOAJ
collection	DOAJ
language	EN
topic	Medicine R Science Q
spellingShingle	Medicine R Science Q Shoaib Ur Rehman Ghulam Qanmber Muhammad Hammad Nadeem Tahir Ahsan Irshad Sajid Fiaz Furqan Ahmad Zulfiqar Ali Muhammad Sajjad Muhammad Shees Muhammad Usman Zhide Geng Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
description	Vascular plant one-zinc-finger (VOZ) transcription factors regulate plant growth and development under drought conditions. Six VOZ transcription factors encoding genes exist in soybean genome (both in Glycine max and Glycine soja). Herein, GmVOZs and GsVOZs were identified through in silico analysis and characterized with different bioinformatics tools and expression analysis. Phylogenetic analysis classified VOZ genes in four groups. Sequence logos analysis among G. max and G. soja amino acid residues revealed higher conservation. Presence of stress related cis-elements in the upstream regions of GmVOZs and GsVOZs highlights their role in tolerance against abiotic stresses. The collinearity analysis identified 14 paralogous/orthologous gene pairs within and between G. max and G. soja. The Ka/Ks values showed that soybean VOZ genes underwent selection pressure with limited functional deviation arising from whole genome and segmental duplication. The GmVOZs and GsVOZs were found to express in roots and leaves at seedling stage. The qRT-PCR revealed that GmVOZs and GsVOZs transcripts can be regulated by abiotic stresses such as polyethylene glycol (PEG). The findings of this study will provide a reference to decipher physiological and molecular functions of VOZ genes in soybean.
format	article
author	Shoaib Ur Rehman Ghulam Qanmber Muhammad Hammad Nadeem Tahir Ahsan Irshad Sajid Fiaz Furqan Ahmad Zulfiqar Ali Muhammad Sajjad Muhammad Shees Muhammad Usman Zhide Geng
author_facet	Shoaib Ur Rehman Ghulam Qanmber Muhammad Hammad Nadeem Tahir Ahsan Irshad Sajid Fiaz Furqan Ahmad Zulfiqar Ali Muhammad Sajjad Muhammad Shees Muhammad Usman Zhide Geng
author_sort	Shoaib Ur Rehman
title	Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
title_short	Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
title_full	Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
title_fullStr	Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
title_full_unstemmed	Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.
title_sort	characterization of vascular plant one-zinc finger (voz) in soybean (glycine max and glycine soja) and their expression analyses under drought condition.
publisher	Public Library of Science (PLoS)
publishDate	2021
url	https://doaj.org/article/fd90fd00d051418ea4e24860b50a1156
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Characterization of Vascular plant One-Zinc finger (VOZ) in soybean (Glycine max and Glycine soja) and their expression analyses under drought condition.

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